Variant report

Variant	rs4758749
Chromosome Location	chr12:60632888-60632889
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10747868	0.80[AFR][1000 genomes]
rs10784035	0.80[AFR][1000 genomes]
rs10784036	0.80[AFR][1000 genomes]
rs10784037	0.83[AFR][1000 genomes]
rs10784038	0.83[AFR][1000 genomes]
rs10784039	0.83[AFR][1000 genomes]
rs10877404	0.80[AFR][1000 genomes]
rs10877405	0.81[AFR][1000 genomes]
rs10877407	0.83[AFR][1000 genomes]
rs10877408	0.83[AFR][1000 genomes]
rs4298941	0.83[AFR][1000 genomes]
rs4329723	0.83[AFR][1000 genomes]
rs4378430	0.80[AFR][1000 genomes]
rs4384408	0.84[AFR][1000 genomes]
rs4417317	0.80[AFR][1000 genomes]
rs4444112	0.83[AFR][1000 genomes]
rs4444113	0.83[AFR][1000 genomes]
rs4450199	0.80[AFR][1000 genomes]
rs4459343	0.81[AFR][1000 genomes]
rs4499037	0.83[AFR][1000 genomes]
rs4567506	0.83[AFR][1000 genomes]
rs4573715	0.83[AFR][1000 genomes]
rs4758748	0.86[AFR][1000 genomes]
rs6581302	0.83[AFR][1000 genomes]
rs6581306	0.83[AFR][1000 genomes]
rs6581307	0.83[AFR][1000 genomes]
rs7132358	0.83[AFR][1000 genomes]
rs7298962	0.81[AFR][1000 genomes]
rs7953100	0.83[AFR][1000 genomes]
rs7956125	0.83[AFR][1000 genomes]
rs7957393	0.83[AFR][1000 genomes]
rs7958344	0.80[AFR][1000 genomes]
rs7960579	0.83[AFR][1000 genomes]
rs7962272	0.81[AFR][1000 genomes]
rs7963402	0.81[AFR][1000 genomes]
rs7971049	0.83[AFR][1000 genomes]
rs7976780	0.83[AFR][1000 genomes]
rs7977625	0.83[AFR][1000 genomes]
rs7980140	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899137	chr12:60568891-60797083	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1054287	chr12:60601870-60861866	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2754064	chr12:60608389-60645117	Enhancers Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv832431	chr12:60626292-60809233	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:60599600-60645400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr12:60632600-60633200	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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