Variant report

Variant	rs4766886
Chromosome Location	chr12:118345121-118345122
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10774966	0.94[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10774967	1.00[CEU][hapmap];0.87[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10774968	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10774971	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10850936	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7972616	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899545	chr12:118316834-118367000	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118344600-118346400	Weak transcription	A549	lung
2	chr12:118344800-118345400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr12:118344800-118345600	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr12:118345000-118345400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:118345000-118345400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr12:118345000-118345400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
7	chr12:118345000-118345400	Enhancers	Esophagus	oesophagus
8	chr12:118345000-118345400	Enhancers	Gastric	stomach
9	chr12:118345000-118345400	Flanking Active TSS	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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