Variant report
| Variant | rs4768109 |
|---|---|
| Chromosome Location | chr12:46658059-46658060 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46597600-46659600 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr12:46635600-46660000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 3 | chr12:46640400-46660600 | Weak transcription | Aorta | Aorta |
| 4 | chr12:46645200-46659600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 5 | chr12:46648400-46658400 | Weak transcription | HUVEC | blood vessel |
| 6 | chr12:46649400-46659600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 7 | chr12:46650400-46659400 | Genic enhancers | Primary B cells from peripheral blood | blood |
| 8 | chr12:46651600-46659600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 9 | chr12:46652000-46659600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 10 | chr12:46652200-46659400 | Enhancers | HepG2 | liver |
| 11 | chr12:46653400-46659600 | Enhancers | Rectal Smooth Muscle | rectum |
| 12 | chr12:46653600-46658200 | Enhancers | Colon Smooth Muscle | Colon |
| 13 | chr12:46653600-46658600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 14 | chr12:46653600-46659200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 15 | chr12:46654000-46659600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 16 | chr12:46654600-46658600 | Genic enhancers | K562 | blood |
| 17 | chr12:46654600-46659000 | Genic enhancers | Primary B cells from cord blood | blood |
| 18 | chr12:46654600-46661000 | Weak transcription | Spleen | Spleen |
| 19 | chr12:46654800-46658800 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 20 | chr12:46654800-46659600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr12:46654800-46659600 | Weak transcription | Brain Angular Gyrus | brain |
| 22 | chr12:46655000-46659600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 23 | chr12:46655600-46659600 | Weak transcription | Fetal Intestine Large | intestine |
| 24 | chr12:46655800-46659000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 25 | chr12:46655800-46659000 | Weak transcription | Fetal Thymus | thymus |
| 26 | chr12:46655800-46659000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 27 | chr12:46656000-46658800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 28 | chr12:46656000-46658800 | Weak transcription | Fetal Kidney | kidney |
| 29 | chr12:46656000-46659000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 30 | chr12:46656000-46659000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 31 | chr12:46656000-46659000 | Weak transcription | Left Ventricle | heart |
| 32 | chr12:46656000-46659000 | Weak transcription | Pancreas | Pancrea |
| 33 | chr12:46656000-46659000 | Weak transcription | Right Atrium | heart |
| 34 | chr12:46656000-46659600 | Weak transcription | Esophagus | oesophagus |
| 35 | chr12:46656000-46659800 | Weak transcription | Fetal Stomach | stomach |
| 36 | chr12:46656000-46660400 | Weak transcription | NHLF | lung |
| 37 | chr12:46656000-46660600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr12:46656000-46660600 | Weak transcription | Lung | lung |
| 39 | chr12:46656200-46659000 | Enhancers | A549 | lung |
| 40 | chr12:46656600-46658800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 41 | chr12:46656800-46658200 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 42 | chr12:46656800-46658400 | Enhancers | H9 Cell Line | embryonic stem cell |
| 43 | chr12:46656800-46658400 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 44 | chr12:46656800-46659400 | Enhancers | Thymus | Thymus |
| 45 | chr12:46657000-46658200 | Enhancers | Fetal Brain Male | brain |
| 46 | chr12:46657000-46658200 | Flanking Active TSS | GM12878-XiMat | blood |
| 47 | chr12:46657000-46659000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr12:46657000-46659600 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 49 | chr12:46657200-46658200 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
| 50 | chr12:46657200-46658200 | Flanking Active TSS | Hela-S3 | cervix |
