Variant report

Variant	rs4768765
Chromosome Location	chr12:47320678-47320679
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11183673	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11183675	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12367351	0.81[AMR][1000 genomes]
rs12581646	1.00[EUR][1000 genomes]
rs17097467	1.00[CEU][hapmap]
rs17097509	1.00[CEU][hapmap]
rs2075335	1.00[CEU][hapmap]
rs2109125	1.00[CEU][hapmap]
rs2287473	1.00[CEU][hapmap]
rs2302855	1.00[CEU][hapmap]
rs2429466	1.00[CEU][hapmap]
rs2429467	1.00[CEU][hapmap]
rs2897981	1.00[CEU][hapmap]
rs4623984	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73287907	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7958193	0.81[AMR][1000 genomes]
rs7963571	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7966649	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845143	chr12:47051076-47431496	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:47319800-47321000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr12:47320600-47320800	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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