Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:30522245..30525192-chr13:30528354..30530435,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1041577	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11839078	0.97[AFR][1000 genomes]
rs11840423	0.86[AFR][1000 genomes]
rs11841787	0.86[AFR][1000 genomes]
rs11842198	0.97[AFR][1000 genomes]
rs11842394	0.92[YRI][hapmap]
rs12583831	0.89[ASN][1000 genomes]
rs17074067	0.92[YRI][hapmap]
rs17074100	1.00[CHB][hapmap];0.81[JPT][hapmap];0.91[ASN][1000 genomes]
rs17074118	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17074120	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4769782	1.00[CHB][hapmap];0.81[JPT][hapmap];0.89[ASN][1000 genomes]
rs61138957	0.91[ASN][1000 genomes]
rs634413	0.82[CHB][hapmap];0.82[ASN][1000 genomes]
rs646917	0.81[CHB][hapmap];0.82[ASN][1000 genomes]
rs7320271	0.84[CHB][hapmap]
rs7339208	0.82[ASN][1000 genomes]
rs73450391	0.86[AFR][1000 genomes]
rs7988422	1.00[ASN][1000 genomes]
rs927733	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3520592	chr13:30243601-30648554	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	esv3520593	chr13:30243601-30648554	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv510598	chr13:30476386-30542798	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:30517400-30526000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr13:30518600-30528600	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr13:30519000-30524000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr13:30523200-30529400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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