The 2.0 version of rSNPBase

Variant report

Variant rs4794261
Chromosome Location chr17:45982346-45982347
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45974200-45982800 Weak transcription Spleen Spleen
2 chr17:45974600-45992000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr17:45975000-45982800 Weak transcription Gastric stomach
4 chr17:45975000-45993400 Weak transcription Placenta Amnion Placenta Amnion
5 chr17:45975200-45999400 Weak transcription Fetal Kidney kidney
6 chr17:45975200-46000400 Weak transcription Small Intestine intestine
7 chr17:45975400-45982400 Weak transcription NHEK skin
8 chr17:45975400-45983000 Weak transcription HUVEC blood vessel
9 chr17:45975600-45992800 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr17:45975800-46000600 Weak transcription Hela-S3 cervix
11 chr17:45976400-45983000 Weak transcription Aorta Aorta
12 chr17:45976400-45993200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr17:45976400-45995400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr17:45976800-45983000 Strong transcription Primary monocytes fromperipheralblood blood
15 chr17:45976800-45987000 Strong transcription Fetal Intestine Small intestine
16 chr17:45977000-45984000 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr17:45977200-45984800 Weak transcription Primary hematopoietic stem cells blood
18 chr17:45977600-45982600 Enhancers Skeletal Muscle Female skeletal muscle
19 chr17:45977600-45982800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr17:45977600-45992800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr17:45977600-45995000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr17:45977800-45982400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr17:45977800-45992000 Weak transcription Dnd41 blood
24 chr17:45977800-45992600 Weak transcription Fetal Intestine Large intestine
25 chr17:45977800-45992600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr17:45977800-45992800 Weak transcription GM12878-XiMat blood
27 chr17:45978000-45982800 Weak transcription Fetal Brain Female brain
28 chr17:45978400-45982400 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr17:45978400-45982400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr17:45978400-45985000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr17:45978800-45985200 Enhancers Psoas Muscle Psoas
32 chr17:45979200-45987400 Weak transcription Thymus Thymus
33 chr17:45979400-45983800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr17:45979400-45984600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr17:45979600-45982600 Weak transcription Primary T cells fromperipheralblood blood
36 chr17:45979600-45982600 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr17:45979600-45983200 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr17:45979600-45984600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr17:45979800-46000400 Weak transcription H9 Cell Line embryonic stem cell
40 chr17:45980000-45982400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr17:45980000-45992600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr17:45980000-45992800 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr17:45980000-45992800 Weak transcription Brain Germinal Matrix brain
44 chr17:45980200-45982600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr17:45980200-45982600 Weak transcription Primary B cells from peripheral blood blood
46 chr17:45980200-45986000 Enhancers Fetal Muscle Trunk muscle
47 chr17:45980200-46001800 Weak transcription K562 blood
48 chr17:45980200-46002400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr17:45980200-46006400 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr17:45980400-45982400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015