Variant report

Variant	rs479506
Chromosome Location	chr7:105423192-105423193
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105418242..105420213-chr7:105421359..105423266,2	K562	blood:

rs_ID	r²[population]
rs1204375	0.90[CEU][hapmap]
rs2529369	0.82[CEU][hapmap];0.93[GIH][hapmap];0.92[MEX][hapmap];0.81[TSI][hapmap]
rs572250	0.95[CEU][hapmap]

SNP	Gene	Cis/trans	Tissue	Source
rs479506	MYL10	cis	parietal	SCAN

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105359800-105438600	Weak transcription	Pancreas	Pancrea
2	chr7:105367200-105428800	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr7:105384600-105438600	Weak transcription	Spleen	Spleen
4	chr7:105385000-105434800	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr7:105389000-105432400	Weak transcription	Esophagus	oesophagus
6	chr7:105393800-105428600	Weak transcription	Brain Hippocampus Middle	brain
7	chr7:105400600-105438400	Weak transcription	Duodenum Mucosa	Duodenum
8	chr7:105400800-105436800	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr7:105402800-105427400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr7:105403000-105428200	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr7:105406600-105428600	Weak transcription	Gastric	stomach
12	chr7:105411200-105423400	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr7:105411200-105426400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr7:105411200-105435400	Weak transcription	Right Atrium	heart
15	chr7:105411400-105424400	Weak transcription	Fetal Stomach	stomach
16	chr7:105411400-105428800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr7:105414200-105427800	Weak transcription	Brain Germinal Matrix	brain
18	chr7:105414400-105432800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr7:105414800-105443600	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr7:105416600-105427400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr7:105416800-105423200	Weak transcription	Fetal Intestine Small	intestine
22	chr7:105416800-105427400	Weak transcription	Left Ventricle	heart
23	chr7:105416800-105428600	Weak transcription	Placenta Amnion	Placenta Amnion
24	chr7:105416800-105433800	Weak transcription	Brain Angular Gyrus	brain
25	chr7:105417200-105441800	Weak transcription	HepG2	liver
26	chr7:105417400-105427400	Weak transcription	Hela-S3	cervix
27	chr7:105417400-105439200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr7:105417800-105426200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr7:105417800-105427400	Weak transcription	Placenta	Placenta
30	chr7:105417800-105430000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr7:105418000-105435400	Weak transcription	Brain Substantia Nigra	brain
32	chr7:105418200-105432400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr7:105418200-105440600	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr7:105418400-105426200	Weak transcription	Skeletal Muscle Female	skeletal muscle
35	chr7:105418400-105426400	Weak transcription	Primary T cells from cord blood	blood
36	chr7:105418400-105427000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr7:105418400-105427400	Weak transcription	Adipose Nuclei	Adipose
38	chr7:105418400-105428400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
39	chr7:105418400-105428600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr7:105418400-105435400	Weak transcription	Right Ventricle	heart
41	chr7:105418400-105436000	Weak transcription	H9 Cell Line	embryonic stem cell
42	chr7:105418400-105439200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr7:105418400-105446400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
44	chr7:105418600-105431600	Weak transcription	HUES48 Cell Line	embryonic stem cell
45	chr7:105418600-105435000	Weak transcription	Liver	Liver
46	chr7:105418600-105435200	Weak transcription	Rectal Smooth Muscle	rectum
47	chr7:105420200-105425000	Weak transcription	Lung	lung
48	chr7:105420600-105435400	Weak transcription	Brain Inferior Temporal Lobe	brain
49	chr7:105420800-105424600	Weak transcription	Fetal Muscle Leg	muscle
50	chr7:105420800-105428800	Weak transcription	HUES6 Cell Line	embryonic stem cell

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