The 2.0 version of rSNPBase

Variant report

Variant rs4797707
Chromosome Location chr18:12869065-12869066
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12838800-12879000 Weak transcription Psoas Muscle Psoas
2 chr18:12844200-12879800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr18:12857400-12872000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr18:12857800-12881600 Weak transcription Fetal Stomach stomach
5 chr18:12858000-12872600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr18:12859600-12876800 Weak transcription Primary T cells from cord blood blood
7 chr18:12861800-12870000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr18:12861800-12872600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr18:12862800-12877000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr18:12863000-12872200 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr18:12863000-12879000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr18:12863000-12879200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr18:12863200-12879000 Weak transcription Muscle Satellite Cultured Cells --
14 chr18:12863200-12879800 Weak transcription Hela-S3 cervix
15 chr18:12863200-12880200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr18:12863400-12872400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr18:12863400-12875400 Weak transcription HepG2 liver
18 chr18:12863400-12875800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr18:12863400-12879200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr18:12863400-12879800 Weak transcription NHEK skin
21 chr18:12863400-12881400 Weak transcription Right Atrium heart
22 chr18:12863600-12872000 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr18:12863600-12872200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr18:12863600-12875600 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr18:12863600-12876200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr18:12863600-12880000 Weak transcription Esophagus oesophagus
27 chr18:12863600-12882000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr18:12863800-12871800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr18:12863800-12872200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr18:12863800-12872200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr18:12863800-12875600 Weak transcription Primary B cells from peripheral blood blood
32 chr18:12863800-12878600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr18:12863800-12880000 Weak transcription Small Intestine intestine
34 chr18:12863800-12880200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr18:12864400-12876400 Weak transcription Primary B cells from cord blood blood
36 chr18:12864400-12876800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr18:12864400-12880000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr18:12864800-12878600 Weak transcription Lung lung
39 chr18:12865000-12872400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr18:12865000-12881800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr18:12865200-12879800 Weak transcription Fetal Lung lung
42 chr18:12865800-12871800 Weak transcription Primary T cells fromperipheralblood blood
43 chr18:12865800-12879200 Weak transcription Pancreas Pancrea
44 chr18:12865800-12883000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr18:12867600-12869200 Enhancers Rectal Mucosa Donor 29 rectum
46 chr18:12867600-12870800 Genic enhancers Fetal Thymus thymus
47 chr18:12868000-12871200 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr18:12868000-12875800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr18:12868200-12877400 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr18:12868400-12877200 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015