Variant report

Variant	rs4799662
Chromosome Location	chr18:30326347-30326348
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10502609	0.89[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11081781	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1965500	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62092147	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30321600-30328800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr18:30321800-30329200	Weak transcription	Primary B cells from peripheral blood	blood
3	chr18:30323000-30335000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr18:30323800-30328000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr18:30324000-30329200	Weak transcription	HepG2	liver
6	chr18:30324000-30333800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr18:30325000-30329200	Weak transcription	Primary B cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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