The 2.0 version of rSNPBase

Variant report

Variant rs4802009
Chromosome Location chr19:39519989-39519990
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39503600-39520200 Weak transcription Liver Liver
2 chr19:39513000-39521600 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr19:39513000-39521600 Weak transcription Right Atrium heart
4 chr19:39514000-39521400 Weak transcription Pancreas Pancrea
5 chr19:39514000-39522200 Weak transcription Gastric stomach
6 chr19:39514400-39520400 Weak transcription Fetal Intestine Large intestine
7 chr19:39514400-39521600 Weak transcription Placenta Amnion Placenta Amnion
8 chr19:39514400-39521800 Weak transcription Colon Smooth Muscle Colon
9 chr19:39514600-39521400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:39514800-39520000 Strong transcription Brain Cingulate Gyrus brain
11 chr19:39515200-39521600 Weak transcription Rectal Smooth Muscle rectum
12 chr19:39516200-39521000 Weak transcription K562 blood
13 chr19:39516200-39521600 Weak transcription Right Ventricle heart
14 chr19:39516400-39522200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr19:39518000-39521200 Weak transcription Placenta Placenta
16 chr19:39518200-39520000 Weak transcription Brain Angular Gyrus brain
17 chr19:39518200-39520600 Weak transcription HepG2 liver
18 chr19:39518200-39521400 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr19:39518200-39521600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr19:39518200-39521600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:39518200-39521600 Weak transcription Esophagus oesophagus
22 chr19:39518200-39521600 Weak transcription Left Ventricle heart
23 chr19:39518200-39521600 Weak transcription NHEK skin
24 chr19:39518200-39521800 Weak transcription Lung lung
25 chr19:39518400-39520600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr19:39518400-39520800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr19:39518400-39521000 Weak transcription Adipose Nuclei Adipose
28 chr19:39518400-39521400 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr19:39518400-39521400 Weak transcription Fetal Stomach stomach
30 chr19:39518400-39521400 Weak transcription HMEC breast
31 chr19:39518400-39521600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr19:39518400-39521600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr19:39518400-39521600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr19:39518400-39521600 Weak transcription Brain Germinal Matrix brain
35 chr19:39518400-39521600 Weak transcription Fetal Kidney kidney
36 chr19:39518400-39521600 Weak transcription Fetal Lung lung
37 chr19:39518400-39521600 Weak transcription Stomach Smooth Muscle stomach
38 chr19:39518400-39521800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr19:39518400-39522000 Weak transcription Aorta Aorta
40 chr19:39518400-39522000 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr19:39518600-39520800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr19:39518600-39521200 Weak transcription Fetal Heart heart
43 chr19:39518600-39521400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr19:39518600-39521400 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr19:39518600-39521400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr19:39518600-39521600 Weak transcription H9 Cell Line embryonic stem cell
47 chr19:39518600-39521600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr19:39518600-39521600 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr19:39518600-39521600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr19:39518600-39521600 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015