The 2.0 version of rSNPBase

Variant report

Variant rs8103187
Chromosome Location chr19:39515307-39515308
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39481000-39516000 Weak transcription Brain Angular Gyrus brain
2 chr19:39487200-39518200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr19:39496600-39515800 Weak transcription Ovary ovary
4 chr19:39498400-39516600 Weak transcription A549 lung
5 chr19:39499400-39516600 Weak transcription Brain Anterior Caudate brain
6 chr19:39499800-39516800 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr19:39500000-39515600 Weak transcription Brain Substantia Nigra brain
8 chr19:39501800-39515800 Weak transcription Adipose Nuclei Adipose
9 chr19:39502000-39515400 Weak transcription Fetal Intestine Small intestine
10 chr19:39502200-39515600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr19:39502400-39518000 Weak transcription Aorta Aorta
12 chr19:39503000-39515400 Weak transcription Brain Hippocampus Middle brain
13 chr19:39503600-39520200 Weak transcription Liver Liver
14 chr19:39504800-39515800 Weak transcription H1 Cell Line embryonic stem cell
15 chr19:39505200-39515600 Weak transcription Esophagus oesophagus
16 chr19:39506800-39515600 Weak transcription Brain Inferior Temporal Lobe brain
17 chr19:39506800-39517200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr19:39507200-39517600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr19:39507400-39515600 Weak transcription Fetal Stomach stomach
20 chr19:39510600-39516800 Weak transcription H9 Cell Line embryonic stem cell
21 chr19:39511200-39517600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr19:39512400-39518000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr19:39513000-39521600 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr19:39513000-39521600 Weak transcription Right Atrium heart
25 chr19:39513200-39517400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr19:39513600-39517400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:39514000-39515800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr19:39514000-39516200 Enhancers K562 blood
29 chr19:39514000-39517600 Weak transcription NHEK skin
30 chr19:39514000-39521400 Weak transcription Pancreas Pancrea
31 chr19:39514000-39522200 Weak transcription Gastric stomach
32 chr19:39514200-39517800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr19:39514200-39517800 Weak transcription Placenta Placenta
34 chr19:39514400-39517400 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr19:39514400-39517400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:39514400-39517800 Weak transcription Brain Germinal Matrix brain
37 chr19:39514400-39517800 Weak transcription Left Ventricle heart
38 chr19:39514400-39520400 Weak transcription Fetal Intestine Large intestine
39 chr19:39514400-39521600 Weak transcription Placenta Amnion Placenta Amnion
40 chr19:39514400-39521800 Weak transcription Colon Smooth Muscle Colon
41 chr19:39514600-39517600 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr19:39514600-39517600 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr19:39514600-39521400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr19:39514800-39517600 Weak transcription Lung lung
45 chr19:39514800-39518600 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr19:39514800-39519600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr19:39514800-39520000 Strong transcription Brain Cingulate Gyrus brain
48 chr19:39515000-39517200 Enhancers GM12878-XiMat blood
49 chr19:39515000-39518000 Strong transcription Stomach Smooth Muscle stomach
50 chr19:39515200-39521600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015