The 2.0 version of rSNPBase

Variant report

Variant rs4814479
Chromosome Location chr20:16362235-16362236
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16315400-16364400 Weak transcription Rectal Smooth Muscle rectum
2 chr20:16316000-16384400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr20:16318800-16368200 Weak transcription Primary B cells from cord blood blood
4 chr20:16334000-16377400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr20:16341200-16371600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr20:16342600-16377400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr20:16343600-16366800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr20:16343600-16384600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr20:16344400-16380200 Weak transcription HSMMtube muscle
10 chr20:16344800-16371400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr20:16344800-16377400 Weak transcription Brain Angular Gyrus brain
12 chr20:16345000-16391200 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr20:16345400-16377400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr20:16345400-16391000 Weak transcription Brain Germinal Matrix brain
15 chr20:16346400-16363200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr20:16346600-16362400 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr20:16346600-16393600 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr20:16347200-16368200 Weak transcription Primary monocytes fromperipheralblood blood
19 chr20:16347600-16392000 Weak transcription Fetal Kidney kidney
20 chr20:16348400-16383600 Weak transcription Small Intestine intestine
21 chr20:16349000-16371800 Weak transcription Stomach Mucosa stomach
22 chr20:16349200-16365000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr20:16349200-16380000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr20:16349400-16364200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr20:16349600-16372200 Weak transcription Colonic Mucosa Colon
26 chr20:16349600-16376400 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr20:16349800-16362800 Weak transcription Osteobl bone
28 chr20:16349800-16381600 Weak transcription Muscle Satellite Cultured Cells --
29 chr20:16350000-16363000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr20:16350000-16366200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr20:16350000-16384000 Weak transcription HepG2 liver
32 chr20:16350000-16384200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr20:16350200-16368200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr20:16350600-16375000 Weak transcription Colon Smooth Muscle Colon
35 chr20:16350800-16384200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr20:16353000-16384200 Weak transcription Primary T cells fromperipheralblood blood
37 chr20:16354600-16362400 Strong transcription Adipose Nuclei Adipose
38 chr20:16355000-16377400 Weak transcription Psoas Muscle Psoas
39 chr20:16355400-16380400 Weak transcription A549 lung
40 chr20:16355400-16385200 Weak transcription Brain Substantia Nigra brain
41 chr20:16355600-16377400 Weak transcription Brain Cingulate Gyrus brain
42 chr20:16356000-16384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr20:16356200-16380000 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr20:16356800-16372000 Weak transcription NHEK skin
45 chr20:16357000-16364600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr20:16357200-16383600 Weak transcription Brain Anterior Caudate brain
47 chr20:16357800-16385400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr20:16359800-16387800 Weak transcription Placenta Placenta
49 chr20:16360000-16364400 Weak transcription Gastric stomach
50 chr20:16360000-16366000 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015