Variant report

Variant rs4823004
Chromosome Location chr22:29412149-29412150
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:29400600-29425400 Weak transcription NHEK skin
2 chr22:29401200-29413400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr22:29401400-29414800 Weak transcription Esophagus oesophagus
4 chr22:29401400-29419200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr22:29401400-29425000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr22:29401800-29426200 Weak transcription Colon Smooth Muscle Colon
7 chr22:29405200-29418000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr22:29405400-29424600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr22:29407800-29413400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr22:29408200-29419400 Weak transcription Fetal Stomach stomach
11 chr22:29408200-29419400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr22:29408200-29422600 Weak transcription Fetal Muscle Trunk muscle
13 chr22:29408400-29412200 Weak transcription Gastric stomach
14 chr22:29408600-29412200 Weak transcription Stomach Mucosa stomach
15 chr22:29408600-29419400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr22:29408600-29419400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr22:29409200-29412200 Weak transcription Fetal Brain Female brain
18 chr22:29409200-29412200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr22:29409200-29414800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr22:29409400-29414800 Weak transcription Aorta Aorta
21 chr22:29409600-29412200 Weak transcription Small Intestine intestine
22 chr22:29409600-29413800 Weak transcription Fetal Lung lung
23 chr22:29409800-29412600 Weak transcription Brain Cingulate Gyrus brain
24 chr22:29410000-29412200 Weak transcription Brain Germinal Matrix brain
25 chr22:29410400-29416000 Enhancers Liver Liver
26 chr22:29410400-29419200 Weak transcription Right Atrium heart
27 chr22:29410400-29424800 Weak transcription Psoas Muscle Psoas
28 chr22:29410600-29412400 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr22:29410800-29412400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr22:29410800-29412400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr22:29410800-29418000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr22:29411000-29412200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr22:29411000-29412200 Weak transcription Fetal Thymus thymus
34 chr22:29411000-29412400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr22:29411000-29414800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr22:29411000-29414800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr22:29411000-29417800 Weak transcription H9 Cell Line embryonic stem cell
38 chr22:29411000-29418400 Weak transcription Right Ventricle heart
39 chr22:29411000-29418800 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr22:29411000-29419200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr22:29411000-29419400 Weak transcription Left Ventricle heart
42 chr22:29411000-29422200 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr22:29411400-29412400 Enhancers HepG2 liver
44 chr22:29411600-29414800 Enhancers Fetal Intestine Small intestine
45 chr22:29411800-29412600 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr22:29411800-29412600 Enhancers HUES6 Cell Line embryonic stem cell
47 chr22:29411800-29413000 Enhancers Primary T cells from cord blood blood
48 chr22:29411800-29414000 Enhancers Duodenum Mucosa Duodenum
49 chr22:29412000-29412400 Enhancers H1 Cell Line embryonic stem cell
50 chr22:29412000-29412600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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