Variant report

Variant	rs4855340
Chromosome Location	chr3:68655281-68655282
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10865637	0.95[EUR][1000 genomes]
rs12639593	0.82[ASN][1000 genomes]
rs2313909	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4855496	0.94[EUR][1000 genomes]
rs56278754	0.80[ASN][1000 genomes]
rs73098743	0.82[ASN][1000 genomes]
rs7430006	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7611990	0.83[ASN][1000 genomes]
rs7627217	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv997335	chr3:68629587-68661747	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68652800-68657200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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