Variant report

Variant	rs7430006
Chromosome Location	chr3:68648862-68648863
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10865637	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11721262	0.81[EUR][1000 genomes]
rs1511909	0.92[CHB][hapmap];0.88[JPT][hapmap]
rs1875829	0.81[EUR][1000 genomes]
rs2313909	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4855340	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4855496	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7627217	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3862	chr3:68608012-68653563	ZNF genes & repeats Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
2	nsv997335	chr3:68629587-68661747	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
3	esv3374222	chr3:68648554-68648884	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68646000-68649000	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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