Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12186524	0.85[EUR][1000 genomes]
rs12188471	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12188709	0.87[EUR][1000 genomes]
rs17592394	0.87[EUR][1000 genomes]
rs17652083	0.86[EUR][1000 genomes]
rs17652137	0.86[EUR][1000 genomes]
rs34208847	0.87[EUR][1000 genomes]
rs3924075	0.85[EUR][1000 genomes]
rs4311426	0.84[CEU][hapmap]
rs56410637	0.87[EUR][1000 genomes]
rs6859904	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6870433	0.87[EUR][1000 genomes]
rs6884693	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6893695	1.00[ASN][1000 genomes]
rs72752395	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72754315	0.87[EUR][1000 genomes]
rs72754317	0.87[EUR][1000 genomes]
rs72754323	0.84[EUR][1000 genomes]
rs72754325	0.85[EUR][1000 genomes]
rs72754327	0.85[EUR][1000 genomes]
rs73072730	0.88[ASN][1000 genomes]
rs73072733	0.88[ASN][1000 genomes]
rs73087091	0.95[ASN][1000 genomes]
rs73087092	0.95[ASN][1000 genomes]
rs7714947	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv881635	chr5:30122190-30371238	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:30147800-30149800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:30149600-30151000	Enhancers	Hela-S3	cervix

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