Variant report

Variant	rs4870368
Chromosome Location	chr6:150516291-150516292
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:150512430..150514564-chr6:150515573..150518401,3	K562	blood:
2	chr6:150514785..150516493-chr6:150643803..150645499,2	K562	blood:
3	chr6:150510588..150515411-chr6:150515857..150521257,7	MCF-7	breast:
4	chr6:150515558..150517711-chr6:150540869..150542397,2	K562	blood:
5	chr6:150514870..150517111-chr6:150523756..150525398,2	MCF-7	breast:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs34244559	1.00[ASN][1000 genomes]
rs4869853	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55747871	1.00[ASN][1000 genomes]
rs7751160	1.00[ASN][1000 genomes]
rs9397729	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs975211	1.00[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150499600-150519600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr6:150508400-150517000	Weak transcription	K562	blood
3	chr6:150510600-150518000	Weak transcription	Psoas Muscle	Psoas
4	chr6:150513600-150517200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:150513800-150516800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:150513800-150517000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr6:150513800-150517000	Weak transcription	NHEK	skin
8	chr6:150514000-150517000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr6:150514000-150517000	Weak transcription	HMEC	breast
10	chr6:150514200-150517000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr6:150514800-150517000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:150514800-150524000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr6:150515000-150517000	Weak transcription	Right Ventricle	heart
14	chr6:150515000-150517800	Weak transcription	Fetal Brain Female	brain
15	chr6:150515200-150516400	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr6:150515200-150518200	Weak transcription	Right Atrium	heart
17	chr6:150515400-150519600	Weak transcription	Fetal Brain Male	brain
18	chr6:150516000-150516600	Weak transcription	Fetal Kidney	kidney
19	chr6:150516000-150517000	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr6:150516000-150517800	Enhancers	Fetal Heart	heart
21	chr6:150516200-150516800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr6:150516200-150517000	Enhancers	Skeletal Muscle Male	skeletal muscle

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