Variant report

Variant	rs4870940
Chromosome Location	chr8:126427503-126427504
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:6)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:126426827..126429676-chr8:126440337..126443092,5	MCF-7	breast:
2	chr8:126422459..126424329-chr8:126426254..126427786,2	MCF-7	breast:
3	chr8:126426883..126429339-chr8:126435080..126436716,2	MCF-7	breast:
4	chr8:126427503..126433063-chr8:126438638..126445840,12	K562	blood:
5	chr8:126427406..126431532-chr8:126436360..126444340,9	K562	blood:
6	chr8:126427250..126429947-chr8:126430087..126432985,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TRIB1-6	chr8:126427143-126427516	NONHSAT128968

No data

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

rs_ID	r²[population]
rs2954011	0.86[ASN][1000 genomes]

SNP	Gene	Cis/trans	Tissue	Source
rs4870940	TRIB1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126417800-126430200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:126421800-126433600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:126423000-126428200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:126423200-126428800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr8:126423400-126429000	Weak transcription	NH-A	brain
6	chr8:126423400-126441200	Weak transcription	Right Atrium	heart
7	chr8:126424800-126430400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr8:126424800-126435200	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr8:126425000-126431200	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr8:126425000-126431200	Weak transcription	NHLF	lung
11	chr8:126425000-126438000	Weak transcription	Duodenum Mucosa	Duodenum
12	chr8:126425200-126428200	Weak transcription	Liver	Liver
13	chr8:126425200-126428600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr8:126425200-126429200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr8:126425200-126429400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr8:126425200-126429400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr8:126425200-126430000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr8:126425200-126431200	Weak transcription	Colonic Mucosa	Colon
19	chr8:126425800-126428200	Enhancers	Placenta	Placenta
20	chr8:126426000-126428200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr8:126426000-126429800	Weak transcription	Osteobl	bone
22	chr8:126426000-126430000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr8:126426000-126439200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr8:126426200-126427800	Weak transcription	Brain Angular Gyrus	brain
25	chr8:126426200-126428200	Weak transcription	Adipose Nuclei	Adipose
26	chr8:126426200-126428600	Enhancers	HepG2	liver
27	chr8:126426200-126429200	Weak transcription	Lung	lung
28	chr8:126426400-126427600	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr8:126426400-126428800	Weak transcription	Brain Anterior Caudate	brain
30	chr8:126426400-126428800	Weak transcription	Spleen	Spleen
31	chr8:126426400-126429200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr8:126426400-126430000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr8:126426400-126430400	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr8:126426600-126427600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
35	chr8:126426600-126427600	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr8:126426600-126428200	Weak transcription	H9 Cell Line	embryonic stem cell
37	chr8:126426600-126428400	Weak transcription	Brain Cingulate Gyrus	brain
38	chr8:126426600-126428600	Weak transcription	A549	lung
39	chr8:126426600-126428800	Weak transcription	Fetal Muscle Leg	muscle
40	chr8:126426600-126429000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr8:126426600-126429200	Weak transcription	K562	blood
42	chr8:126426600-126429800	Weak transcription	Cortex derived primary cultured neurospheres	brain
43	chr8:126426600-126430000	Weak transcription	Brain Hippocampus Middle	brain
44	chr8:126427200-126428000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr8:126427200-126428600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
46	chr8:126427200-126429200	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr8:126427200-126433800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr8:126427400-126427600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr8:126427400-126427600	Enhancers	iPS-18 Cell Line	embryonic stem cell
50	chr8:126427400-126427800	Enhancers	Hela-S3	cervix

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