Variant report

Variant	rs487147
Chromosome Location	chr3:118135310-118135311
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1083825	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1614410	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs488628	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs504005	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs513011	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs517313	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs540615	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs542459	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs545252	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:118129200-118139400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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