Variant report

Variant	rs4871593
Chromosome Location	chr8:126437630-126437631
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126364442..126366316-chr8:126435893..126438793,2	K562	blood:
2	chr8:126412429..126413958-chr8:126437402..126438965,2	MCF-7	breast:
3	chr8:126435775..126439025-chr8:126439650..126442842,6	K562	blood:
4	chr8:126425069..126427223-chr8:126437128..126439624,2	K562	blood:
5	chr8:126423668..126425842-chr8:126436681..126438719,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs2385110	0.93[GIH][hapmap]
rs3201475	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs745653	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4871593	TRIB1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126423400-126441200	Weak transcription	Right Atrium	heart
2	chr8:126425000-126438000	Weak transcription	Duodenum Mucosa	Duodenum
3	chr8:126426000-126439200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:126428600-126438200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:126429000-126438600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr8:126429000-126439200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr8:126429400-126439000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr8:126429600-126438800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:126430000-126438400	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr8:126430200-126438400	Weak transcription	Adipose Nuclei	Adipose
11	chr8:126430400-126441000	Weak transcription	Brain Cingulate Gyrus	brain
12	chr8:126430600-126438200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr8:126430600-126438200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr8:126431600-126438200	Weak transcription	Colonic Mucosa	Colon
15	chr8:126432000-126438000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr8:126432000-126438000	Weak transcription	A549	lung
17	chr8:126432000-126439400	Weak transcription	Fetal Stomach	stomach
18	chr8:126433000-126441200	Weak transcription	HMEC	breast
19	chr8:126433600-126439400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr8:126433800-126438000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr8:126434000-126440200	Weak transcription	Spleen	Spleen
22	chr8:126435200-126438400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr8:126435200-126438600	Enhancers	Hela-S3	cervix
24	chr8:126435400-126438000	Weak transcription	HepG2	liver
25	chr8:126435400-126441200	Weak transcription	GM12878-XiMat	blood
26	chr8:126435600-126439000	Weak transcription	Fetal Thymus	thymus
27	chr8:126435600-126439600	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr8:126436000-126441200	Weak transcription	Primary B cells from cord blood	blood
29	chr8:126436200-126438800	Enhancers	Liver	Liver
30	chr8:126436200-126441000	Weak transcription	Primary monocytes fromperipheralblood	blood
31	chr8:126436400-126441200	Weak transcription	Primary B cells from peripheral blood	blood
32	chr8:126436800-126438200	Weak transcription	Pancreas	Pancrea
33	chr8:126436800-126440800	Weak transcription	K562	blood
34	chr8:126436800-126441400	Weak transcription	Ovary	ovary
35	chr8:126437400-126439600	Enhancers	HUVEC	blood vessel

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