Variant report

Variant rs4880609
Chromosome Location chr10:394052-394053
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:370400-418200 Weak transcription Small Intestine intestine
2 chr10:375800-402200 Weak transcription Psoas Muscle Psoas
3 chr10:375800-418800 Weak transcription Right Atrium heart
4 chr10:375800-419800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr10:380200-397400 Weak transcription Primary T cells fromperipheralblood blood
6 chr10:380200-397400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr10:380200-423200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr10:380400-397400 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr10:381000-397400 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr10:383800-400600 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr10:383800-424200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr10:383800-433000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr10:384000-394600 Weak transcription HSMM muscle
14 chr10:384000-400400 Weak transcription H9 Cell Line embryonic stem cell
15 chr10:384000-406400 Weak transcription HepG2 liver
16 chr10:384000-414400 Weak transcription H1 Cell Line embryonic stem cell
17 chr10:384400-394600 Weak transcription Fetal Brain Male brain
18 chr10:384600-405600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr10:384600-415200 Weak transcription Fetal Heart heart
20 chr10:385000-400800 Weak transcription Colonic Mucosa Colon
21 chr10:385600-409200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr10:385600-417200 Weak transcription A549 lung
23 chr10:385800-399800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr10:388800-407400 Weak transcription NH-A brain
25 chr10:390800-394400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr10:391200-397400 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr10:391400-394400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr10:391400-395200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr10:391400-399800 Weak transcription Muscle Satellite Cultured Cells --
30 chr10:391400-414600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr10:393200-394200 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
32 chr10:393200-394600 ZNF genes & repeats Fetal Intestine Small intestine
33 chr10:393200-395600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr10:393200-395600 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr10:393200-414600 Strong transcription Fetal Stomach stomach
36 chr10:393600-406200 Strong transcription Liver Liver
37 chr10:393800-394200 Strong transcription Gastric stomach
38 chr10:393800-394400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
39 chr10:393800-394600 Strong transcription iPS-15b Cell Line embryonic stem cell
40 chr10:393800-394600 ZNF genes & repeats Thymus Thymus
41 chr10:393800-394800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr10:393800-394800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr10:393800-395000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr10:393800-395200 Strong transcription Fetal Kidney kidney
45 chr10:393800-395200 Strong transcription Rectal Smooth Muscle rectum
46 chr10:393800-395400 Strong transcription HUES6 Cell Line embryonic stem cell
47 chr10:393800-395400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr10:393800-395400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr10:393800-395400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr10:393800-395400 Strong transcription Aorta Aorta

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