Variant report

Variant	rs4886777
Chromosome Location	chr15:76482618-76482619
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr15:76481901-76484038	A549	lung:	n/a	chr15:76483268-76483284 chr15:76483269-76483290 chr15:76483271-76483278 chr15:76483267-76483285 chr15:76483801-76483814 chr15:76483318-76483326
2	MAX	chr15:76482441-76482833	K562	blood:	n/a	chr15:76482702-76482712
3	USF1	chr15:76482553-76482868	K562	blood:	n/a	n/a
4	MAX	chr15:76482608-76482777	K562	blood:	n/a	chr15:76482702-76482712
5	BHLHE40	chr15:76482536-76482865	K562	blood:	n/a	n/a
6	MAX	chr15:76482604-76482848	NB4	blood:	n/a	chr15:76482702-76482712

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:76481529..76484202-chr15:76633877..76636476,2	K562	blood:
2	chr15:76472338..76474227-chr15:76482406..76484297,2	K562	blood:

Variant related genes	Relation type
C15orf27	TF binding region
ENSG00000270036	Chromatin interaction
ENSG00000259514	Chromatin interaction
ENSG00000259422	Chromatin interaction

Extended variants
information (count: 140 )
Associated
traits (count: 15 )

rSNPs within LD-proxies of this variant (count:113)

rs_ID	r²[population]
rs11072576	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11072577	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11072578	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11072579	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11072580	0.86[CHB][hapmap]
rs11072583	0.91[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11072585	0.91[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11072587	0.91[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11629459	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11631690	0.81[EUR][1000 genomes]
rs11631764	0.81[EUR][1000 genomes]
rs11631874	0.84[EUR][1000 genomes]
rs11633405	0.82[EUR][1000 genomes]
rs11634019	0.84[MEX][hapmap]
rs11634060	0.86[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.81[EUR][1000 genomes]
rs11634472	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11636278	0.82[EUR][1000 genomes]
rs11636851	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11637473	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11637855	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12050813	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12050896	0.91[CEU][hapmap];1.00[CHB][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12439484	0.86[CHB][hapmap]
rs12442266	0.86[CHB][hapmap]
rs12443449	0.81[EUR][1000 genomes]
rs12592501	0.86[CHB][hapmap]
rs12595211	0.86[CHB][hapmap]
rs12595717	0.80[CHB][hapmap]
rs12898415	0.86[CHB][hapmap]
rs12901160	0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs12902506	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs12907668	0.85[CHB][hapmap]
rs12908334	0.85[CHB][hapmap]
rs12909718	0.85[CHB][hapmap]
rs12913096	0.86[CHB][hapmap]
rs1474117	0.86[CHB][hapmap]
rs16968083	0.91[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.82[EUR][1000 genomes]
rs17361504	0.86[CHB][hapmap]
rs1850722	0.87[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1875887	0.96[ASN][1000 genomes]
rs1875888	0.95[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2007928	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2016734	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2176623	0.86[CHB][hapmap]
rs2404974	0.87[CEU][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2456046	0.86[CHB][hapmap]
rs2456049	0.98[ASN][1000 genomes]
rs2456050	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2456057	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2456071	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2469541	0.86[CHB][hapmap];0.90[MEX][hapmap]
rs2469542	0.84[CHB][hapmap]
rs2469548	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2469565	0.88[CHB][hapmap];0.80[ASN][1000 genomes]
rs2469566	0.80[ASN][1000 genomes]
rs2938697	0.85[ASN][1000 genomes]
rs2959850	0.91[CHB][hapmap]
rs2959853	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs35831705	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3759853	0.86[CHB][hapmap]
rs3784449	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3898352	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3915459	0.81[EUR][1000 genomes]
rs3915460	0.81[EUR][1000 genomes]
rs3927264	0.80[EUR][1000 genomes]
rs3958426	0.82[EUR][1000 genomes]
rs3991792	0.81[EUR][1000 genomes]
rs3991793	0.81[EUR][1000 genomes]
rs3991794	0.82[EUR][1000 genomes]
rs4592616	0.86[EUR][1000 genomes]
rs4886484	0.86[CHB][hapmap]
rs4886485	0.82[CHB][hapmap]
rs4886486	0.81[EUR][1000 genomes]
rs4886487	0.82[EUR][1000 genomes]
rs4886488	0.81[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs4886779	0.95[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];0.89[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4886781	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4886783	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4886784	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4886787	0.91[CEU][hapmap];1.00[CHB][hapmap];0.83[YRI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4886788	0.91[CEU][hapmap];1.00[CHB][hapmap]
rs4886789	0.91[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4886791	0.87[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.82[GIH][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.81[EUR][1000 genomes]
rs5012144	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55805818	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56737606	0.83[EUR][1000 genomes]
rs57182285	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60017340	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60290059	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60371615	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61018254	0.81[EUR][1000 genomes]
rs61275737	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61300240	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62027018	0.82[EUR][1000 genomes]
rs62027048	0.81[EUR][1000 genomes]
rs62030232	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6495197	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7174889	0.86[CHB][hapmap];0.82[ASN][1000 genomes]
rs7177923	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7179750	0.82[EUR][1000 genomes]
rs7180462	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.93[GIH][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.82[EUR][1000 genomes]
rs8028504	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.93[GIH][hapmap];0.80[JPT][hapmap];0.94[MEX][hapmap];0.92[TSI][hapmap];0.82[EUR][1000 genomes]
rs8029637	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.91[GIH][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.82[EUR][1000 genomes]
rs8030454	0.83[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.82[EUR][1000 genomes]
rs8033494	0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8039063	0.87[CEU][hapmap];0.91[CHB][hapmap];0.88[CHD][hapmap];0.88[TSI][hapmap];0.84[EUR][1000 genomes]
rs869452	0.86[CHB][hapmap]
rs870295	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs879625	0.95[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs883993	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs937732	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs937733	1.00[CHB][hapmap];0.86[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs959991	0.86[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv569998	chr15:76232605-76550938	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
2	nsv1048760	chr15:76334544-76496977	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv833057	chr15:76367848-76585868	ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
4	nsv1039595	chr15:76431374-76483342	Enhancers Bivalent Enhancer Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
5	nsv1045860	chr15:76431374-76485536	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
6	nsv1053643	chr15:76431374-76485966	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
7	nsv1052496	chr15:76432823-76484981	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
8	nsv1036319	chr15:76432823-76489955	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
9	nsv1035806	chr15:76435640-76483342	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
10	nsv1047539	chr15:76435640-76485966	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
11	nsv1042750	chr15:76435640-76490547	ZNF genes & repeats Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
12	nsv1054289	chr15:76437970-76485966	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
13	nsv1035389	chr15:76444695-76483342	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
14	nsv1041435	chr15:76444695-76484981	Bivalent Enhancer ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
15	nsv1046448	chr15:76444695-76485966	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
16	nsv1046099	chr15:76444695-76490547	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
17	nsv1054300	chr15:76445689-76483342	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
18	nsv1044603	chr15:76445689-76484981	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
19	nsv1043026	chr15:76445689-76485966	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
20	nsv1040683	chr15:76454194-76483342	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
21	nsv1041619	chr15:76454194-76484981	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
22	nsv1046485	chr15:76454194-76485536	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
23	nsv1053572	chr15:76454194-76485966	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
24	nsv1049916	chr15:76454194-76490547	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
25	nsv1046563	chr15:76460462-76483342	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
26	nsv1053775	chr15:76460462-76485966	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
27	nsv1054713	chr15:76460462-76505906	Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:15)

SNP	Gene	Cis/trans	Tissue	Source
rs4886777	ISL2	cis	lymphoblastoid	seeQTL
rs4886777	SCAPER	cis	Thyroid	GTEx
rs4886777	ZNF291	cis	multi-tissue	Pritchard
rs4886777	SCAPER	Cis_1M	lymphoblastoid	RTeQTL
rs4886777	SGK269	cis	parietal	SCAN
rs4886777	ETFA	cis	multi-tissue	Pritchard
rs4886777	ISL2	Cis_1M	lymphoblastoid	RTeQTL
rs4886777	SCAPER	cis	lung	GTEx
rs4886777	ZNF291	cis	normal skin	skin_eQTL
rs4886777	ISL2	cis	Whole Blood	GTEx
rs4886777	RP11-593F23.1	cis	Skin Sun Exposed Lower leg	GTEx
rs4886777	SCAPER	cis	Whole Blood	GTEx
rs4886777	SCAPER	cis	parietal	SCAN
rs4886777	ZNF291	cis	uninvolved skin	skin_eQTL
rs4886777	SCAPER	cis	cerebellum	SCAN

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:76443200-76483000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr15:76470600-76482800	Weak transcription	A549	lung
3	chr15:76476400-76482800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr15:76478200-76488400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr15:76478600-76482800	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr15:76478600-76487800	Weak transcription	Right Atrium	heart
7	chr15:76478800-76482800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr15:76478800-76482800	Weak transcription	HMEC	breast
9	chr15:76479200-76483000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr15:76479800-76483000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr15:76479800-76487400	Weak transcription	Psoas Muscle	Psoas
12	chr15:76481800-76484800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr15:76482200-76482800	Enhancers	Placenta	Placenta
14	chr15:76482400-76482800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr15:76482400-76483200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr15:76482600-76482800	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
17	chr15:76482600-76482800	Active TSS	Esophagus	oesophagus
18	chr15:76482600-76482800	Active TSS	Hela-S3	cervix
19	chr15:76482600-76483000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr15:76482600-76483000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
21	chr15:76482600-76483000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr15:76482600-76483000	Bivalent Enhancer	Fetal Lung	lung
23	chr15:76482600-76483000	Enhancers	Pancreas	Pancrea
24	chr15:76482600-76483000	Bivalent Enhancer	Rectal Mucosa Donor 31	rectum
25	chr15:76482600-76483000	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
26	chr15:76482600-76483000	Enhancers	Stomach Mucosa	stomach
27	chr15:76482600-76483000	Enhancers	GM12878-XiMat	blood
28	chr15:76482600-76483000	Bivalent Enhancer	NHEK	skin
29	chr15:76482600-76483200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr15:76482600-76483200	Flanking Bivalent TSS/Enh	HepG2	liver
31	chr15:76482600-76483600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr15:76482600-76483800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
33	chr15:76482600-76484200	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
34	chr15:76482600-76484400	Enhancers	Spleen	Spleen
35	chr15:76482600-76484600	Enhancers	Gastric	stomach

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