Variant report

Variant	rs4890676
Chromosome Location	chr18:44174981-44174982
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10502872	1.00[AFR][1000 genomes]
rs12454666	1.00[AFR][1000 genomes]
rs17769999	1.00[AFR][1000 genomes]
rs3886794	1.00[AFR][1000 genomes]
rs4890680	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428355	chr18:44160181-44406285	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44172200-44176200	Weak transcription	Left Ventricle	heart
2	chr18:44172400-44175400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr18:44172400-44176200	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr18:44174600-44176200	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr18:44174600-44179800	Weak transcription	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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