Variant report

Variant	rs4899365
Chromosome Location	chr14:71135027-71135028
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71105533..71111408-chr14:71129587..71135247,9	MCF-7	breast:
2	chr14:71132827..71135159-chr14:71171125..71172879,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000133985	Chromatin interaction
ENSG00000259115	Chromatin interaction
ENSG00000245466	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1076265	0.82[CHB][hapmap]
rs17176699	0.89[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1831100	chr14:71132235-71139550	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71112800-71140000	Weak transcription	Fetal Brain Male	brain
2	chr14:71115200-71137000	Weak transcription	Fetal Stomach	stomach
3	chr14:71122800-71136600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr14:71122800-71138000	Weak transcription	Fetal Muscle Leg	muscle
5	chr14:71128400-71140800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr14:71128800-71138000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr14:71129000-71137000	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr14:71130200-71136600	Weak transcription	Primary hematopoietic stem cells	blood
9	chr14:71131200-71139600	Weak transcription	Fetal Muscle Trunk	muscle
10	chr14:71131600-71138000	Weak transcription	Aorta	Aorta
11	chr14:71131800-71135600	Strong transcription	Brain Germinal Matrix	brain
12	chr14:71132800-71137000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr14:71132800-71138000	Genic enhancers	Primary B cells from peripheral blood	blood
14	chr14:71133000-71135800	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr14:71133000-71136600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr14:71133000-71137400	Weak transcription	Lung	lung
17	chr14:71133000-71138200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr14:71133200-71137000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr14:71133200-71137200	Weak transcription	Gastric	stomach
20	chr14:71133200-71137400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr14:71133200-71137400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr14:71133200-71137400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr14:71133200-71137600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr14:71133200-71138200	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr14:71133200-71139000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr14:71133200-71140400	Weak transcription	Fetal Intestine Small	intestine
27	chr14:71133200-71140600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr14:71133200-71140600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr14:71133200-71140600	Weak transcription	Fetal Thymus	thymus
30	chr14:71133200-71144200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
31	chr14:71133200-71150600	Weak transcription	Pancreas	Pancrea
32	chr14:71133200-71151000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
33	chr14:71133200-71173000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr14:71133400-71135400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
35	chr14:71133400-71138000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr14:71133400-71141600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr14:71133600-71136000	Weak transcription	Fetal Heart	heart
38	chr14:71133600-71138000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr14:71133600-71140600	Strong transcription	HUES48 Cell Line	embryonic stem cell
40	chr14:71133600-71143000	Strong transcription	H1 Cell Line	embryonic stem cell
41	chr14:71133600-71143800	Weak transcription	Small Intestine	intestine
42	chr14:71133800-71136000	Weak transcription	Primary T cells from cord blood	blood
43	chr14:71133800-71136000	Weak transcription	Thymus	Thymus
44	chr14:71133800-71137400	Weak transcription	Muscle Satellite Cultured Cells	--
45	chr14:71133800-71137600	Weak transcription	NHEK	skin
46	chr14:71133800-71137800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
47	chr14:71133800-71139000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr14:71133800-71141000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
49	chr14:71134000-71137800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr14:71134000-71143400	Strong transcription	iPS-20b Cell Line	embryonic stem cell

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