Variant report

Variant	rs4903021
Chromosome Location	chr14:72911885-72911886
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs2238186	0.87[ASN][1000 genomes]
rs2238188	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2283382	0.84[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs4903024	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72905600-72912200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr14:72906600-72913600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:72907000-72912000	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr14:72908400-72917600	Weak transcription	Lung	lung
5	chr14:72909400-72912000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
6	chr14:72910000-72912000	Enhancers	Primary T cells fromperipheralblood	blood
7	chr14:72910200-72912000	Enhancers	Primary hematopoietic stem cells	blood
8	chr14:72911000-72912000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr14:72911400-72912000	Enhancers	Primary T cells from cord blood	blood
10	chr14:72911600-72912000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr14:72911600-72912400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr14:72911600-72912400	Weak transcription	Gastric	stomach
13	chr14:72911600-72916200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr14:72911600-72916400	Weak transcription	Fetal Muscle Trunk	muscle
15	chr14:72911600-72916400	Weak transcription	Dnd41	blood
16	chr14:72911800-72913800	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr14:72911800-72916200	Weak transcription	GM12878-XiMat	blood
18	chr14:72911800-72917200	Weak transcription	Primary T helper cells PMA-I stimulated	--
19	chr14:72911800-72917200	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr14:72911800-72917600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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