Variant report

Variant rs4916242
Chromosome Location chr1:172059997-172059998
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172040600-172076600 Weak transcription Brain Angular Gyrus brain
2 chr1:172041200-172060800 Weak transcription Brain Substantia Nigra brain
3 chr1:172041400-172061600 Weak transcription Brain Cingulate Gyrus brain
4 chr1:172041600-172061800 Weak transcription Brain Anterior Caudate brain
5 chr1:172041800-172061200 Weak transcription Brain Hippocampus Middle brain
6 chr1:172046600-172076800 Weak transcription Fetal Brain Female brain
7 chr1:172048000-172083800 Weak transcription Aorta Aorta
8 chr1:172049400-172110800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:172052400-172060800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:172052400-172091600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:172057800-172060600 Weak transcription Ovary ovary
12 chr1:172057800-172074000 Weak transcription Fetal Lung lung
13 chr1:172058800-172060000 Enhancers HUES48 Cell Line embryonic stem cell
14 chr1:172059400-172060000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:172059400-172060000 Enhancers Fetal Intestine Small intestine
16 chr1:172059600-172060000 Enhancers Fetal Intestine Large intestine
17 chr1:172059600-172064800 Weak transcription Fetal Stomach stomach
18 chr1:172059800-172060200 Enhancers Breast Myoepithelial Primary Cells Breast

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