Variant report

Variant	rs4933209
Chromosome Location	chr10:93344793-93344794
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs41403949	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4933208	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61644446	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73318259	0.86[ASN][1000 genomes]
rs7903829	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv19622	chr10:93305214-93361590	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93327800-93347400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:93335000-93347600	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr10:93342200-93347600	Weak transcription	Rectal Smooth Muscle	rectum
4	chr10:93342400-93347400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr10:93342400-93347400	Weak transcription	Colon Smooth Muscle	Colon
6	chr10:93342600-93346200	Weak transcription	Hela-S3	cervix
7	chr10:93342600-93346800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr10:93342600-93347400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr10:93342800-93346200	Weak transcription	Left Ventricle	heart
10	chr10:93342800-93346200	Weak transcription	Psoas Muscle	Psoas
11	chr10:93342800-93346400	Weak transcription	Aorta	Aorta
12	chr10:93342800-93346800	Weak transcription	Stomach Smooth Muscle	stomach
13	chr10:93342800-93347400	Weak transcription	HSMMtube	muscle
14	chr10:93343000-93347400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr10:93343000-93348200	Weak transcription	Fetal Intestine Large	intestine
16	chr10:93343200-93346200	Weak transcription	Skeletal Muscle Male	skeletal muscle
17	chr10:93343400-93345200	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr10:93343800-93345400	Weak transcription	Fetal Heart	heart
19	chr10:93344000-93346800	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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