The 2.0 version of rSNPBase

Variant report

Variant rs4941940
Chromosome Location chr13:40253901-40253902
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40230600-40254600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr13:40230600-40254600 Weak transcription Lung lung
3 chr13:40230600-40254800 Weak transcription Aorta Aorta
4 chr13:40230600-40263800 Weak transcription Spleen Spleen
5 chr13:40230800-40254600 Weak transcription Left Ventricle heart
6 chr13:40230800-40254600 Weak transcription Psoas Muscle Psoas
7 chr13:40230800-40254800 Weak transcription Fetal Thymus thymus
8 chr13:40230800-40256400 Weak transcription Placenta Amnion Placenta Amnion
9 chr13:40230800-40258400 Weak transcription Colonic Mucosa Colon
10 chr13:40230800-40262000 Weak transcription Thymus Thymus
11 chr13:40230800-40275000 Weak transcription Right Ventricle heart
12 chr13:40231000-40254400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr13:40231000-40254400 Weak transcription Stomach Smooth Muscle stomach
14 chr13:40231000-40254600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr13:40231000-40254600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr13:40231000-40254600 Weak transcription NHLF lung
17 chr13:40231000-40256400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr13:40231000-40256400 Weak transcription NHEK skin
19 chr13:40231000-40257200 Weak transcription HMEC breast
20 chr13:40231000-40261800 Weak transcription Brain Substantia Nigra brain
21 chr13:40231000-40266200 Weak transcription Rectal Smooth Muscle rectum
22 chr13:40231000-40270800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr13:40231000-40286000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr13:40231200-40254400 Weak transcription Muscle Satellite Cultured Cells --
25 chr13:40231200-40254600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr13:40231200-40254800 Weak transcription Fetal Stomach stomach
27 chr13:40231400-40254600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr13:40231400-40264200 Weak transcription Esophagus oesophagus
29 chr13:40231400-40268000 Weak transcription Small Intestine intestine
30 chr13:40231600-40254400 Weak transcription Fetal Brain Male brain
31 chr13:40231600-40270200 Weak transcription Gastric stomach
32 chr13:40232000-40254600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr13:40233000-40254600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr13:40233000-40273600 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr13:40233000-40295600 Weak transcription Pancreas Pancrea
36 chr13:40233200-40254600 Weak transcription Brain Hippocampus Middle brain
37 chr13:40233600-40254200 Weak transcription Fetal Brain Female brain
38 chr13:40233800-40254600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr13:40234800-40254400 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr13:40235600-40254400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr13:40235800-40254600 Weak transcription NH-A brain
42 chr13:40236600-40254800 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr13:40236800-40261600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr13:40238000-40291600 Weak transcription Fetal Intestine Small intestine
45 chr13:40238600-40261600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr13:40240200-40254400 Weak transcription Fetal Kidney kidney
47 chr13:40240200-40254400 Weak transcription Dnd41 blood
48 chr13:40240200-40254600 Weak transcription HSMMtube muscle
49 chr13:40240600-40257000 Weak transcription Brain Germinal Matrix brain
50 chr13:40241000-40254400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015