Variant report

Variant	rs4944145
Chromosome Location	chr11:76870634-76870635
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11605022	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4944143	0.84[CEU][hapmap]
rs4944144	0.84[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1816632	chr11:76751285-76927014	Enhancers Bivalent Enhancer Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76852800-76873000	Weak transcription	Ovary	ovary
2	chr11:76862400-76872000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:76864800-76882200	Weak transcription	HepG2	liver
4	chr11:76865000-76882800	Strong transcription	Fetal Intestine Large	intestine
5	chr11:76865600-76882000	Strong transcription	Fetal Intestine Small	intestine
6	chr11:76866000-76872400	Weak transcription	Spleen	Spleen
7	chr11:76869000-76870800	Enhancers	Placenta Amnion	Placenta Amnion
8	chr11:76869400-76889200	Weak transcription	Pancreas	Pancrea
9	chr11:76870000-76872400	Bivalent Enhancer	Placenta	Placenta
10	chr11:76870600-76871400	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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