Variant report

Variant	rs4944571
Chromosome Location	chr11:86108474-86108475
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10501617	0.84[CEU][hapmap]
rs1541309	1.00[JPT][hapmap]
rs4382935	1.00[JPT][hapmap]
rs4944574	0.84[CEU][hapmap]
rs4944576	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55734103	0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7548	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7930619	1.00[JPT][hapmap]
rs9795296	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86105200-86108800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr11:86105400-86108600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr11:86105800-86109400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr11:86106400-86108800	Enhancers	HUVEC	blood vessel
5	chr11:86106600-86109000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr11:86106600-86111400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr11:86106600-86114800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr11:86106600-86134600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr11:86107000-86108800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr11:86107000-86110000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr11:86107200-86122400	Weak transcription	Aorta	Aorta
12	chr11:86107800-86111800	Weak transcription	NHLF	lung
13	chr11:86108000-86109200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr11:86108200-86127400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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