Variant report

Variant	rs4944576
Chromosome Location	chr11:86121964-86121965
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:86117387..86119595-chr11:86121640..86124123,2	K562	blood:
2	chr11:86118884..86121555-chr11:86121901..86123435,2	MCF-7	breast:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10501617	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs10501618	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs11234642	0.84[EUR][1000 genomes]
rs11234649	0.84[EUR][1000 genomes]
rs11234656	0.84[EUR][1000 genomes]
rs11607319	0.84[EUR][1000 genomes]
rs12272337	0.84[EUR][1000 genomes]
rs12272824	0.83[EUR][1000 genomes]
rs12274297	0.84[EUR][1000 genomes]
rs12289721	0.84[EUR][1000 genomes]
rs12804997	1.00[JPT][hapmap]
rs1452135	0.84[EUR][1000 genomes]
rs1541309	1.00[JPT][hapmap]
rs1597792	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs1839940	0.84[EUR][1000 genomes]
rs28436284	0.84[EUR][1000 genomes]
rs3741006	0.84[CEU][hapmap];0.84[EUR][1000 genomes]
rs4382935	1.00[JPT][hapmap]
rs4586193	0.83[EUR][1000 genomes]
rs4943940	0.84[EUR][1000 genomes]
rs4944571	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4944573	0.83[EUR][1000 genomes]
rs4944574	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs4944578	0.84[EUR][1000 genomes]
rs55734103	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59419027	0.85[EUR][1000 genomes]
rs7120275	0.84[EUR][1000 genomes]
rs7548	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7926796	0.84[EUR][1000 genomes]
rs7930223	0.84[EUR][1000 genomes]
rs7930619	1.00[JPT][hapmap]
rs7932498	0.83[EUR][1000 genomes]
rs7932514	0.84[EUR][1000 genomes]
rs7947537	0.83[EUR][1000 genomes]
rs7949910	0.84[EUR][1000 genomes]
rs9795296	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86106600-86134600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:86107200-86122400	Weak transcription	Aorta	Aorta
3	chr11:86108200-86127400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr11:86108600-86138600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr11:86111200-86124200	Weak transcription	Brain Anterior Caudate	brain
6	chr11:86117800-86142200	Weak transcription	Fetal Stomach	stomach
7	chr11:86118200-86124800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr11:86118200-86130400	Weak transcription	Brain Substantia Nigra	brain
9	chr11:86118200-86151000	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr11:86118400-86131000	Weak transcription	Stomach Smooth Muscle	stomach
11	chr11:86118400-86142800	Weak transcription	Left Ventricle	heart
12	chr11:86119000-86126200	Weak transcription	Fetal Muscle Leg	muscle
13	chr11:86119000-86127200	Weak transcription	Gastric	stomach
14	chr11:86119200-86125800	Weak transcription	Brain Cingulate Gyrus	brain
15	chr11:86119400-86122000	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr11:86119400-86135000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr11:86119600-86142200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr11:86120600-86124000	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr11:86121200-86127600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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