Variant report

Variant	rs4944572
Chromosome Location	chr11:86112735-86112736
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1042780	0.93[CHB][hapmap]
rs10501617	0.93[CHB][hapmap]
rs10501618	0.87[CHB][hapmap]
rs11234640	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11234642	0.81[ASN][1000 genomes]
rs1452133	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1452138	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1597792	0.93[CHB][hapmap]
rs2034622	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3741006	0.93[CHB][hapmap]
rs3741007	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3819227	0.88[CHB][hapmap]
rs3824954	0.89[CEU][hapmap];0.93[CHB][hapmap];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4944574	0.93[CHB][hapmap]
rs6592293	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7947323	0.93[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86106600-86114800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr11:86106600-86134600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:86107200-86122400	Weak transcription	Aorta	Aorta
4	chr11:86108200-86127400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr11:86108600-86138600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:86111200-86124200	Weak transcription	Brain Anterior Caudate	brain
7	chr11:86112200-86118200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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