Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:45495745..45498371-chr10:45630285..45633118,2	K562	blood:
2	chr10:45495575..45498371-chr10:45631618..45633906,2	K562	blood:

Variant related genes	Relation type
ENSG00000165512	Chromatin interaction
ENSG00000165511	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10751371	0.87[EUR][1000 genomes]
rs10751373	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793584	0.86[EUR][1000 genomes]
rs12413346	0.86[EUR][1000 genomes]
rs12414221	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12415640	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1856591	0.86[EUR][1000 genomes]
rs2153333	0.87[EUR][1000 genomes]
rs3862873	0.86[EUR][1000 genomes]
rs3862877	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3927771	0.86[EUR][1000 genomes]
rs4068923	0.84[EUR][1000 genomes]
rs4068926	0.86[EUR][1000 genomes]
rs4113135	0.91[EUR][1000 genomes]
rs4379782	0.85[EUR][1000 genomes]
rs4472887	0.83[EUR][1000 genomes]
rs4500437	0.86[EUR][1000 genomes]
rs4511242	0.84[EUR][1000 genomes]
rs4948945	0.80[EUR][1000 genomes]
rs4948948	0.85[EUR][1000 genomes]
rs4948949	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6593460	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7080443	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7084047	0.91[EUR][1000 genomes]
rs7902898	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7923293	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831848	chr10:45490176-45667670	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	esv2750897	chr10:45550145-45820136	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
3	nsv947903	chr10:45598715-45657182	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45631800-45635400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr10:45632000-45635800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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