Variant report
Variant | rs4949786 |
---|---|
Chromosome Location | chr1:77725120-77725121 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:77723558..77725362-chr1:77729194..77730896,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11162307 | 1.00[ASN][1000 genomes] |
rs11584919 | 1.00[CHB][hapmap] |
rs11590456 | 1.00[CHB][hapmap] |
rs1167202 | 1.00[CHB][hapmap] |
rs1167212 | 1.00[CHB][hapmap] |
rs12119637 | 0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12124822 | 1.00[CHB][hapmap] |
rs12125503 | 1.00[CHB][hapmap] |
rs12126117 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12128049 | 1.00[CHB][hapmap] |
rs12130590 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12132273 | 1.00[CHB][hapmap] |
rs12132703 | 0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12133976 | 1.00[CHB][hapmap] |
rs12135530 | 0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs12135843 | 1.00[CHB][hapmap] |
rs12136415 | 1.00[CHB][hapmap] |
rs12141929 | 1.00[CHB][hapmap] |
rs1377737 | 1.00[CHB][hapmap] |
rs1453981 | 1.00[CHB][hapmap] |
rs17098287 | 1.00[CHB][hapmap] |
rs17100458 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
rs17100463 | 1.00[CHB][hapmap] |
rs17100476 | 1.00[CHB][hapmap] |
rs4949652 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4949788 | 0.81[CEU][hapmap];1.00[CHB][hapmap] |
rs4949794 | 1.00[CHB][hapmap] |
rs4949801 | 1.00[ASN][1000 genomes] |
rs72679521 | 1.00[ASN][1000 genomes] |
rs72683952 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7546963 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv432398 | chr1:77707391-77740836 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:77724200-77727000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |