The 2.0 version of rSNPBase

Variant report

Variant rs5030460
Chromosome Location chr11:36517241-36517242
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:36490000-36530400 Weak transcription Esophagus oesophagus
2 chr11:36500800-36522400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr11:36502200-36523400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr11:36504400-36524000 Weak transcription Stomach Mucosa stomach
5 chr11:36504800-36517400 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr11:36504800-36517600 Strong transcription Fetal Muscle Leg muscle
7 chr11:36504800-36521200 Strong transcription Fetal Intestine Large intestine
8 chr11:36504800-36521600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr11:36504800-36521800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr11:36504800-36522800 Strong transcription Liver Liver
11 chr11:36504800-36523000 Strong transcription Fetal Muscle Trunk muscle
12 chr11:36505200-36521600 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr11:36505400-36520800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr11:36505400-36521600 Strong transcription Duodenum Mucosa Duodenum
15 chr11:36505400-36523200 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr11:36505800-36520800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr11:36506000-36520400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr11:36506000-36520800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr11:36506400-36517600 Strong transcription HSMMtube muscle
20 chr11:36506600-36523200 Strong transcription Placenta Placenta
21 chr11:36507400-36524800 Weak transcription Psoas Muscle Psoas
22 chr11:36507600-36521800 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr11:36508800-36530400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr11:36509200-36520400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr11:36509800-36521600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr11:36510000-36520200 Strong transcription Left Ventricle heart
27 chr11:36510000-36523200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
28 chr11:36510000-36525600 Strong transcription Fetal Thymus thymus
29 chr11:36510200-36520200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:36510200-36521600 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr11:36510200-36523400 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr11:36510400-36520400 Strong transcription Primary hematopoietic stem cells blood
33 chr11:36510400-36520600 Strong transcription NH-A brain
34 chr11:36510400-36521800 Strong transcription Primary monocytes fromperipheralblood blood
35 chr11:36510400-36523000 Strong transcription Primary T cells fromperipheralblood blood
36 chr11:36510400-36523000 Strong transcription Adipose Nuclei Adipose
37 chr11:36510400-36523800 Strong transcription Primary B cells from cord blood blood
38 chr11:36510600-36520800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr11:36510600-36521400 Strong transcription HUVEC blood vessel
40 chr11:36510600-36524600 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr11:36510600-36525400 Strong transcription Primary B cells from peripheral blood blood
42 chr11:36510800-36520000 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr11:36510800-36520200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:36510800-36523200 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr11:36511000-36520200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr11:36511000-36521600 Strong transcription Osteobl bone
47 chr11:36511000-36526000 Strong transcription Dnd41 blood
48 chr11:36511200-36519000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr11:36511800-36523400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr11:36512200-36517800 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015