Variant report

Variant rs523076
Chromosome Location chr6:33685505-33685506
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:33679800-33685600 Weak transcription Placenta Placenta
2 chr6:33680000-33686000 Weak transcription Right Ventricle heart
3 chr6:33680000-33689400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:33680000-33690000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:33680000-33690200 Weak transcription Psoas Muscle Psoas
6 chr6:33680000-33693000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr6:33680000-33695200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:33680000-33695800 Weak transcription Spleen Spleen
9 chr6:33680000-33696200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:33680000-33698400 Weak transcription Placenta Amnion Placenta Amnion
11 chr6:33680000-33705000 Weak transcription Brain Angular Gyrus brain
12 chr6:33681600-33685800 Enhancers HepG2 liver
13 chr6:33681800-33689200 Enhancers Pancreas Pancrea
14 chr6:33682600-33686200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr6:33683000-33686600 Enhancers Stomach Mucosa stomach
16 chr6:33683200-33686000 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr6:33683200-33686200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr6:33684000-33686200 Enhancers Liver Liver
19 chr6:33684000-33686200 Enhancers NHEK skin
20 chr6:33684000-33686600 Enhancers Left Ventricle heart
21 chr6:33684000-33687000 Enhancers HMEC breast
22 chr6:33684200-33685600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr6:33684200-33686000 Weak transcription Fetal Brain Female brain
24 chr6:33684200-33687400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:33684200-33688200 Enhancers Fetal Lung lung
26 chr6:33684400-33688000 Weak transcription Gastric stomach
27 chr6:33684600-33688200 Enhancers Fetal Brain Male brain
28 chr6:33684600-33688600 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr6:33684800-33685800 Enhancers NHLF lung
30 chr6:33684800-33686400 Enhancers Colon Smooth Muscle Colon
31 chr6:33684800-33686600 Enhancers Rectal Smooth Muscle rectum
32 chr6:33685000-33685800 Enhancers Skeletal Muscle Female skeletal muscle
33 chr6:33685000-33686400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:33685000-33686400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:33685000-33686600 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr6:33685000-33686600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:33685000-33686600 Enhancers Fetal Stomach stomach
38 chr6:33685000-33686600 Enhancers Skeletal Muscle Male skeletal muscle
39 chr6:33685000-33686800 Enhancers Fetal Muscle Leg muscle
40 chr6:33685000-33687400 Enhancers Duodenum Smooth Muscle Duodenum
41 chr6:33685200-33686000 Weak transcription Lung lung
42 chr6:33685200-33686200 Weak transcription Esophagus oesophagus
43 chr6:33685200-33686400 Enhancers Brain Hippocampus Middle brain
44 chr6:33685200-33686600 Enhancers Fetal Muscle Trunk muscle
45 chr6:33685200-33688000 Weak transcription GM12878-XiMat blood
46 chr6:33685200-33693400 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr6:33685400-33685600 Weak transcription Brain Cingulate Gyrus brain
48 chr6:33685400-33685800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:33685400-33685800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:33685400-33685800 Weak transcription Right Atrium heart

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