The 2.0 version of rSNPBase

Variant report

Variant rs527380
Chromosome Location chr13:30136108-30136109
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30097200-30138400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr13:30103800-30137200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr13:30105200-30136800 Weak transcription Brain Germinal Matrix brain
4 chr13:30113200-30141600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr13:30113800-30136200 Weak transcription Rectal Smooth Muscle rectum
6 chr13:30123000-30138600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr13:30123600-30136200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr13:30125000-30137200 Weak transcription Brain Anterior Caudate brain
9 chr13:30125000-30147400 Weak transcription A549 lung
10 chr13:30125800-30136600 Weak transcription Brain Hippocampus Middle brain
11 chr13:30125800-30142200 Weak transcription K562 blood
12 chr13:30125800-30143200 Weak transcription Gastric stomach
13 chr13:30126000-30137000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr13:30126000-30138400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr13:30126000-30161400 Weak transcription Primary B cells from cord blood blood
16 chr13:30126200-30137200 Weak transcription H9 Cell Line embryonic stem cell
17 chr13:30126200-30147200 Weak transcription Spleen Spleen
18 chr13:30127400-30142200 Weak transcription Placenta Amnion Placenta Amnion
19 chr13:30127600-30137200 Weak transcription Brain Cingulate Gyrus brain
20 chr13:30127600-30137800 Weak transcription Stomach Smooth Muscle stomach
21 chr13:30127600-30144000 Weak transcription Fetal Intestine Small intestine
22 chr13:30127600-30146200 Weak transcription Right Ventricle heart
23 chr13:30127600-30151400 Weak transcription Aorta Aorta
24 chr13:30127600-30156400 Weak transcription Lung lung
25 chr13:30127800-30136200 Weak transcription Ovary ovary
26 chr13:30127800-30136800 Weak transcription Brain Angular Gyrus brain
27 chr13:30127800-30137200 Weak transcription Pancreas Pancrea
28 chr13:30127800-30137800 Weak transcription Brain Substantia Nigra brain
29 chr13:30127800-30137800 Weak transcription Colon Smooth Muscle Colon
30 chr13:30127800-30143200 Weak transcription Fetal Thymus thymus
31 chr13:30127800-30147400 Weak transcription Fetal Intestine Large intestine
32 chr13:30127800-30147600 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr13:30128000-30136200 Weak transcription HepG2 liver
34 chr13:30128000-30136600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr13:30128000-30139400 Weak transcription Left Ventricle heart
36 chr13:30128000-30143600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr13:30128000-30146800 Weak transcription HSMMtube muscle
38 chr13:30128000-30163600 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr13:30128200-30136600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr13:30128200-30137200 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr13:30128200-30138200 Weak transcription Fetal Muscle Leg muscle
42 chr13:30128200-30143600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr13:30128200-30146000 Weak transcription Hela-S3 cervix
44 chr13:30128200-30147400 Weak transcription Primary hematopoietic stem cells blood
45 chr13:30128200-30147400 Weak transcription Thymus Thymus
46 chr13:30128400-30136600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr13:30128400-30137800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr13:30128400-30138400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr13:30128400-30143400 Weak transcription Fetal Muscle Trunk muscle
50 chr13:30128600-30136200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015