Variant report

Variant	rs528391647
Chromosome Location	chr8:35395836-35395837
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017085	chr8:34742896-35594241	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv539546	chr8:34742896-35594241	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv520421	chr8:35155517-35479468	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv1024397	chr8:35296922-35424277	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
6	esv1824129	chr8:35395787-35400084	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
7	esv1842463	chr8:35395787-35400084	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35359800-35397200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:35391600-35397000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr8:35391600-35401400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr8:35391800-35396200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr8:35392000-35397000	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr8:35392000-35397000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr8:35392600-35397000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr8:35392800-35396600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr8:35393000-35397200	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr8:35393400-35397000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr8:35393800-35399800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr8:35395800-35397200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links