The 2.0 version of rSNPBase

Variant report

Variant rs529409384
Chromosome Location chr18:45390131-45390132
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45345400-45400200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr18:45366600-45408200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr18:45372200-45396000 Weak transcription NHLF lung
4 chr18:45382200-45420400 Weak transcription Right Ventricle heart
5 chr18:45383000-45396600 Strong transcription Hela-S3 cervix
6 chr18:45383600-45392400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr18:45384200-45398800 Weak transcription Pancreas Pancrea
8 chr18:45384200-45421200 Weak transcription Gastric stomach
9 chr18:45384200-45423000 Weak transcription Lung lung
10 chr18:45384400-45390200 Weak transcription Rectal Smooth Muscle rectum
11 chr18:45384400-45390200 Weak transcription Stomach Smooth Muscle stomach
12 chr18:45384400-45392200 Strong transcription HSMM muscle
13 chr18:45384400-45397600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr18:45384400-45397800 Weak transcription Small Intestine intestine
15 chr18:45384400-45400200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr18:45384400-45401200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr18:45384400-45410200 Weak transcription Aorta Aorta
18 chr18:45384400-45419600 Weak transcription K562 blood
19 chr18:45384400-45423000 Weak transcription Spleen Spleen
20 chr18:45384600-45396600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr18:45384600-45399000 Weak transcription Right Atrium heart
22 chr18:45384800-45392200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr18:45384800-45392600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr18:45384800-45396800 Weak transcription Colon Smooth Muscle Colon
25 chr18:45384800-45400200 Weak transcription Brain Substantia Nigra brain
26 chr18:45384800-45407000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr18:45384800-45418400 Weak transcription Fetal Brain Male brain
28 chr18:45385400-45396800 Weak transcription Stomach Mucosa stomach
29 chr18:45385400-45400000 Weak transcription Brain Cingulate Gyrus brain
30 chr18:45385600-45400000 Weak transcription Brain Hippocampus Middle brain
31 chr18:45385600-45420800 Weak transcription Brain Germinal Matrix brain
32 chr18:45385800-45394000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr18:45385800-45396000 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr18:45386200-45391200 Strong transcription A549 lung
35 chr18:45386200-45392600 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr18:45386400-45401800 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr18:45386600-45394200 Weak transcription Osteobl bone
38 chr18:45386600-45395800 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr18:45386600-45396800 Weak transcription NHEK skin
40 chr18:45386600-45397400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr18:45386800-45392400 Strong transcription Fetal Lung lung
42 chr18:45386800-45393400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr18:45386800-45394800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr18:45386800-45395600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr18:45386800-45395800 Strong transcription HUES6 Cell Line embryonic stem cell
46 chr18:45386800-45397800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr18:45386800-45420400 Weak transcription H9 Cell Line embryonic stem cell
48 chr18:45386800-45420600 Weak transcription Esophagus oesophagus
49 chr18:45387000-45393400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr18:45387000-45394800 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015