The 2.0 version of rSNPBase

Variant report

Variant rs529497828
Chromosome Location chr10:93365389-93365390
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93357600-93368000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr10:93357800-93367600 Weak transcription Brain Hippocampus Middle brain
3 chr10:93358400-93366400 Enhancers Hela-S3 cervix
4 chr10:93358400-93367600 Weak transcription Brain Anterior Caudate brain
5 chr10:93361000-93367400 Weak transcription Psoas Muscle Psoas
6 chr10:93361200-93366400 Enhancers Fetal Heart heart
7 chr10:93361800-93365600 Enhancers HSMM muscle
8 chr10:93362000-93365400 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr10:93362000-93365400 Enhancers HSMMtube muscle
10 chr10:93362200-93365400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr10:93362200-93365400 Enhancers Fetal Lung lung
12 chr10:93362400-93365600 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr10:93362400-93365600 Enhancers Fetal Stomach stomach
14 chr10:93362800-93367600 Weak transcription Right Ventricle heart
15 chr10:93363000-93365400 Enhancers NHEK skin
16 chr10:93363200-93365600 Enhancers NHLF lung
17 chr10:93363200-93365800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr10:93363400-93365400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr10:93363400-93365600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:93363400-93365600 Enhancers Osteobl bone
21 chr10:93363600-93365600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr10:93363800-93365400 Enhancers Duodenum Smooth Muscle Duodenum
23 chr10:93363800-93365400 Enhancers Rectal Smooth Muscle rectum
24 chr10:93363800-93365400 Enhancers HMEC breast
25 chr10:93363800-93367400 Weak transcription Pancreas Pancrea
26 chr10:93363800-93367600 Weak transcription Brain Cingulate Gyrus brain
27 chr10:93364000-93365400 Enhancers Colon Smooth Muscle Colon
28 chr10:93364000-93367400 Weak transcription Aorta Aorta
29 chr10:93364000-93367400 Weak transcription Right Atrium heart
30 chr10:93364000-93367800 Weak transcription Stomach Mucosa stomach
31 chr10:93364200-93367400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr10:93364400-93365400 Enhancers Fetal Kidney kidney
33 chr10:93364400-93367400 Weak transcription Ovary ovary
34 chr10:93364600-93366200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr10:93364600-93368400 Weak transcription Gastric stomach
36 chr10:93364800-93365400 Enhancers Muscle Satellite Cultured Cells --
37 chr10:93364800-93365600 Enhancers NH-A brain
38 chr10:93364800-93365800 Enhancers NHDF-Ad bronchial
39 chr10:93364800-93367400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr10:93364800-93367400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr10:93364800-93367400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr10:93365000-93365600 Enhancers HUVEC blood vessel
43 chr10:93365200-93365400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr10:93365200-93365400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr10:93365200-93365600 ZNF genes & repeats A549 lung
46 chr10:93365200-93367600 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015