Variant report

Variant rs532902060
Chromosome Location chr19:20981652-20981653
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
3 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
5 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr19:20974800-20992000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr19:20975200-20982200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr19:20975200-20983600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
11 chr19:20975200-20983600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
12 chr19:20975200-20984800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
13 chr19:20975200-20989400 ZNF genes & repeats Primary hematopoietic stem cells blood
14 chr19:20975200-20992000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
15 chr19:20975400-20982000 Weak transcription Brain Anterior Caudate brain
16 chr19:20975600-20984400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr19:20975600-20984800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
18 chr19:20975600-20985400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
19 chr19:20975600-20989200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr19:20976200-20982800 Strong transcription Primary T helper naive cells from peripheral blood blood
21 chr19:20976200-20983400 ZNF genes & repeats Thymus Thymus
22 chr19:20976200-20983600 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
23 chr19:20976400-20985000 ZNF genes & repeats Fetal Lung lung
24 chr19:20976600-20981800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
25 chr19:20976600-20990800 ZNF genes & repeats Dnd41 blood
26 chr19:20976800-20990800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
27 chr19:20977000-20983400 Weak transcription NHDF-Ad bronchial
28 chr19:20977000-20991200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
29 chr19:20977600-20983200 ZNF genes & repeats Fetal Intestine Small intestine
30 chr19:20977600-20983400 ZNF genes & repeats Primary B cells from cord blood blood
31 chr19:20977600-20983600 ZNF genes & repeats Primary T cells fromperipheralblood blood
32 chr19:20977600-20991000 ZNF genes & repeats Primary T cells from cord blood blood
33 chr19:20977800-20983200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr19:20977800-20983200 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
35 chr19:20977800-20983400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
36 chr19:20977800-20983600 ZNF genes & repeats H9 Cell Line embryonic stem cell
37 chr19:20977800-20984400 ZNF genes & repeats Fetal Brain Female brain
38 chr19:20977800-20990200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
39 chr19:20978200-20984800 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
40 chr19:20978400-20985000 ZNF genes & repeats Adipose Nuclei Adipose
41 chr19:20978400-20991200 ZNF genes & repeats H1 Cell Line embryonic stem cell
42 chr19:20978600-20982400 Strong transcription Ovary ovary
43 chr19:20978800-20982600 Weak transcription Stomach Mucosa stomach
44 chr19:20978800-20982800 Strong transcription HSMM muscle
45 chr19:20978800-20987600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr19:20979000-20982400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr19:20979000-20982600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr19:20979000-20982800 Weak transcription Right Ventricle heart
49 chr19:20979000-20983200 Weak transcription Brain Hippocampus Middle brain
50 chr19:20979000-20983200 Weak transcription HMEC breast

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