The 2.0 version of rSNPBase

Variant report

Variant rs534820227
Chromosome Location chr10:93176987-93176988
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93170800-93204600 Weak transcription Gastric stomach
2 chr10:93171000-93195000 Weak transcription Left Ventricle heart
3 chr10:93171600-93180400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr10:93171800-93180400 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr10:93171800-93203200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr10:93172200-93195200 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr10:93172800-93180400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr10:93172800-93186200 Weak transcription Ovary ovary
9 chr10:93173200-93194800 Weak transcription Brain Germinal Matrix brain
10 chr10:93174600-93198000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr10:93174800-93177000 Weak transcription Fetal Heart heart
12 chr10:93175000-93180400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr10:93175000-93180400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr10:93175000-93180600 Weak transcription NHLF lung
15 chr10:93175000-93192600 Weak transcription Fetal Kidney kidney
16 chr10:93175000-93204200 Weak transcription Fetal Brain Male brain
17 chr10:93175000-93205400 Weak transcription Aorta Aorta
18 chr10:93175000-93208800 Weak transcription Adipose Nuclei Adipose
19 chr10:93175600-93180600 Weak transcription HMEC breast
20 chr10:93175600-93182800 Weak transcription HSMMtube muscle
21 chr10:93175800-93180400 Weak transcription NH-A brain
22 chr10:93176000-93180600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr10:93176200-93180400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr10:93176200-93180400 Weak transcription Muscle Satellite Cultured Cells --
25 chr10:93176200-93180600 Weak transcription HSMM muscle
26 chr10:93176400-93180400 Weak transcription Osteobl bone
27 chr10:93176400-93185800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr10:93176600-93177000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr10:93176600-93177600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr10:93176600-93180400 Weak transcription A549 lung
31 chr10:93176600-93182800 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr10:93176600-93204000 Weak transcription Brain Anterior Caudate brain
33 chr10:93176600-93205400 Weak transcription Duodenum Mucosa Duodenum
34 chr10:93176600-93212600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr10:93176800-93180200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr10:93176800-93180200 Weak transcription Psoas Muscle Psoas
37 chr10:93176800-93180400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr10:93176800-93180400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr10:93176800-93180600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr10:93176800-93180600 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr10:93176800-93183000 Weak transcription Brain Hippocampus Middle brain
42 chr10:93176800-93185600 Weak transcription Fetal Lung lung
43 chr10:93176800-93196800 Weak transcription Brain Angular Gyrus brain
44 chr10:93176800-93199800 Weak transcription Colon Smooth Muscle Colon
45 chr10:93176800-93203600 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015