Variant report

Variant rs534892
Chromosome Location chr6:31763942-31763943
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31761000-31764000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:31761000-31764600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr6:31761200-31764000 Active TSS GM12878-XiMat blood
4 chr6:31761400-31764200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr6:31761400-31764400 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr6:31761800-31764000 Active TSS HSMMtube muscle
7 chr6:31761800-31764000 Active TSS NHLF lung
8 chr6:31761800-31764200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr6:31761800-31764200 Active TSS iPS-15b Cell Line embryonic stem cell
10 chr6:31761800-31764200 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr6:31761800-31764400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:31762000-31764000 Active TSS H1 Cell Line embryonic stem cell
13 chr6:31762000-31764000 Flanking Active TSS Primary hematopoietic stem cells blood
14 chr6:31762000-31764200 Active TSS H9 Cell Line embryonic stem cell
15 chr6:31762000-31764200 Active TSS Psoas Muscle Psoas
16 chr6:31762200-31764000 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr6:31762200-31764000 Active TSS HUES48 Cell Line embryonic stem cell
18 chr6:31762200-31764000 Active TSS HUES6 Cell Line embryonic stem cell
19 chr6:31762200-31764000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
20 chr6:31762200-31764000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr6:31762200-31764000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:31762200-31764000 Active TSS NHDF-Ad bronchial
23 chr6:31762200-31764200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:31762200-31764200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
25 chr6:31762200-31764200 Active TSS Brain Hippocampus Middle brain
26 chr6:31762200-31764200 Active TSS Duodenum Smooth Muscle Duodenum
27 chr6:31762200-31764200 Active TSS A549 lung
28 chr6:31762200-31764200 Active TSS HSMM muscle
29 chr6:31762400-31764000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:31762400-31764000 Active TSS HUES64 Cell Line embryonic stem cell
31 chr6:31762400-31764000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
32 chr6:31762400-31764000 Active TSS Aorta Aorta
33 chr6:31762400-31764000 Active TSS Ovary ovary
34 chr6:31762400-31764200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr6:31762400-31764200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr6:31762400-31764200 Active TSS iPS-18 Cell Line embryonic stem cell
37 chr6:31762400-31764200 Active TSS Left Ventricle heart
38 chr6:31762400-31764200 Active TSS Sigmoid Colon Sigmoid Colon
39 chr6:31762400-31764400 Active TSS Hela-S3 cervix
40 chr6:31762600-31764000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:31762600-31764000 Active TSS Colon Smooth Muscle Colon
42 chr6:31762600-31764000 Active TSS Esophagus oesophagus
43 chr6:31762600-31764000 Active TSS Fetal Kidney kidney
44 chr6:31762600-31764000 Active TSS Pancreatic Islets Pancreatic Islet
45 chr6:31762600-31764000 Active TSS Rectal Smooth Muscle rectum
46 chr6:31762600-31764000 Transcr. at gene 5' and 3' Right Atrium heart
47 chr6:31762600-31764200 Active TSS Primary T cells from cord blood blood
48 chr6:31762600-31764200 Active TSS Osteobl bone
49 chr6:31762600-31764400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr6:31762800-31764000 Active TSS Brain Inferior Temporal Lobe brain

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