Variant report

Variant rs536929656
Chromosome Location chr3:75471962-75471963
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:75463200-75474600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr3:75464000-75476000 Weak transcription Pancreas Pancrea
3 chr3:75464200-75474800 Weak transcription Brain Hippocampus Middle brain
4 chr3:75465400-75474000 Weak transcription Fetal Intestine Large intestine
5 chr3:75465400-75474800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr3:75465400-75476200 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr3:75465600-75474600 Weak transcription Right Ventricle heart
8 chr3:75465600-75474600 Weak transcription Stomach Smooth Muscle stomach
9 chr3:75465600-75474800 Weak transcription Aorta Aorta
10 chr3:75467000-75472000 Weak transcription Lung lung
11 chr3:75467000-75477000 Weak transcription NH-A brain
12 chr3:75467200-75472200 Weak transcription Gastric stomach
13 chr3:75467200-75474600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr3:75467600-75474600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:75467600-75484400 Weak transcription Stomach Mucosa stomach
16 chr3:75467800-75474600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr3:75467800-75474600 Weak transcription Spleen Spleen
18 chr3:75467800-75476400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr3:75467800-75480000 Weak transcription A549 lung
20 chr3:75467800-75483600 Weak transcription Primary hematopoietic stem cells blood
21 chr3:75468000-75474800 Weak transcription H9 Cell Line embryonic stem cell
22 chr3:75468400-75473200 Enhancers Fetal Muscle Leg muscle
23 chr3:75468800-75474800 Weak transcription NHLF lung
24 chr3:75469400-75483000 Weak transcription NHEK skin
25 chr3:75469600-75474800 Weak transcription Ovary ovary
26 chr3:75469600-75483600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr3:75470000-75477600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:75470000-75478200 Weak transcription HMEC breast
29 chr3:75470000-75482200 Weak transcription Right Atrium heart
30 chr3:75470200-75474600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr3:75470200-75474800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr3:75470200-75478600 Weak transcription Fetal Lung lung
33 chr3:75470200-75483400 Weak transcription Rectal Smooth Muscle rectum
34 chr3:75470200-75483600 Weak transcription Brain Substantia Nigra brain
35 chr3:75470400-75476400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr3:75470400-75478600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr3:75470400-75483400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr3:75470600-75474400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:75470600-75474600 Weak transcription Primary B cells from peripheral blood blood
40 chr3:75470800-75473000 Weak transcription Liver Liver
41 chr3:75470800-75478200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr3:75470800-75482400 Weak transcription Psoas Muscle Psoas
43 chr3:75470800-75482600 Strong transcription Fetal Stomach stomach
44 chr3:75471400-75472000 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr3:75471400-75472000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr3:75471400-75472000 Enhancers Primary T helper cells PMA-I stimulated --
47 chr3:75471400-75472600 Enhancers Muscle Satellite Cultured Cells --
48 chr3:75471400-75472600 Strong transcription Fetal Intestine Small intestine
49 chr3:75471400-75472600 Enhancers Osteobl bone
50 chr3:75471400-75476400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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