Variant report

Variant	rs537414
Chromosome Location	chr9:73435315-73435316
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs4412420	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs505107	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs506067	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs529897	0.92[ASN][1000 genomes]
rs532855	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs561022	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs564929	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7038646	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73411200-73437400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr9:73418200-73444000	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr9:73418200-73447400	Weak transcription	Fetal Kidney	kidney
4	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
5	chr9:73429400-73438400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr9:73429600-73440000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr9:73430800-73437800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr9:73432200-73438400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr9:73432200-73438400	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr9:73432400-73436600	Weak transcription	Fetal Heart	heart
11	chr9:73434200-73439000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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