Variant report

Variant	rs537813608
Chromosome Location	chr2:34829251-34829252
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:46 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006001	chr2:33991364-34858721	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv535628	chr2:33991364-34858721	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv999091	chr2:34154486-34993188	ZNF genes & repeats Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
4	nsv535629	chr2:34154486-34993188	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
5	nsv873804	chr2:34156867-35047107	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
6	nsv873810	chr2:34456200-35047107	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv1002396	chr2:34581285-34993188	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
8	nsv535633	chr2:34581285-34993188	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
9	nsv1005269	chr2:34703116-34898472	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv873821	chr2:34738616-35416075	Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
11	nsv1003361	chr2:34746445-35202302	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
12	nsv430668	chr2:34750545-34868864	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
13	nsv518535	chr2:34750545-34877933	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
14	nsv1011904	chr2:34784330-34928973	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
15	nsv1010374	chr2:34791069-34928600	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
16	nsv873822	chr2:34796732-34869662	Enhancers ZNF genes & repeats Active TSS	lncRNA	n/a	inside rSNPs	diseases
17	nsv581373	chr2:34811114-34947118	Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
18	nsv873823	chr2:34814518-34931915	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
19	nsv873824	chr2:34814518-34933685	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
20	esv3513832	chr2:34826098-34830396	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
21	esv3513831	chr2:34826498-34830346	Enhancers Active TSS	n/a	n/a	inside rSNPs	n/a
22	esv1926029	chr2:34827055-34829482	Enhancers Active TSS	n/a	n/a	inside rSNPs	n/a
23	esv3459521	chr2:34827083-34829409	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
24	esv3513830	chr2:34827104-34829412	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
25	nsv9502	chr2:34827107-34830501	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
26	esv3513834	chr2:34827120-34829365	Enhancers	n/a	n/a	inside rSNPs	n/a
27	esv3513833	chr2:34827123-34829381	Enhancers	n/a	n/a	inside rSNPs	n/a
28	esv1805088	chr2:34827166-34829378	Enhancers	n/a	n/a	inside rSNPs	n/a
29	esv1807443	chr2:34827166-34829378	Enhancers	n/a	n/a	inside rSNPs	n/a
30	nsv471777	chr2:34827181-34829746	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
31	esv3459522	chr2:34827209-34829304	Enhancers	n/a	n/a	inside rSNPs	n/a
32	esv3513835	chr2:34827209-34829304	Enhancers	n/a	n/a	inside rSNPs	n/a
33	esv1812819	chr2:34827252-34831768	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
34	esv1805047	chr2:34827388-34829588	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
35	esv1813502	chr2:34827388-34830405	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
36	nsv517738	chr2:34828378-34877933	Active TSS ZNF genes & repeats Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
37	esv2760540	chr2:34828677-34865070	Active TSS Enhancers ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases
38	esv3442180	chr2:34828749-34829412	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
39	esv4087	chr2:34828783-34829409	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
40	esv3524505	chr2:34828791-34829351	Enhancers	n/a	n/a	inside rSNPs	n/a
41	esv3524506	chr2:34828791-34829351	Enhancers	n/a	n/a	inside rSNPs	n/a
42	esv3460882	chr2:34828951-34829423	Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
43	esv3460883	chr2:34829032-34829292	Enhancers	n/a	n/a	inside rSNPs	n/a
44	esv3511346	chr2:34829032-34829292	Enhancers	n/a	n/a	inside rSNPs	n/a
45	esv1099046	chr2:34829052-34829311	Enhancers	n/a	n/a	inside rSNPs	n/a
46	nsv214081	chr2:34829089-34829347	Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:34829200-34829600	Enhancers	Brain Germinal Matrix	brain

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