Variant report

Variant rs538591424
Chromosome Location chr16:72465541-72465542
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:14 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72457200-72467600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr16:72458600-72465600 Active TSS Brain Anterior Caudate brain
3 chr16:72458600-72465800 Active TSS Brain Angular Gyrus brain
4 chr16:72458600-72465800 Active TSS Brain Cingulate Gyrus brain
5 chr16:72458800-72466000 Active TSS Brain Hippocampus Middle brain
6 chr16:72460000-72471200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr16:72462000-72465800 Active TSS Brain Inferior Temporal Lobe brain
8 chr16:72464200-72466000 Enhancers Fetal Brain Male brain
9 chr16:72464800-72467000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr16:72465000-72466400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr16:72465200-72465600 Flanking Active TSS Fetal Brain Female brain
12 chr16:72465400-72465600 Flanking Active TSS Brain Germinal Matrix brain
13 chr16:72465400-72465600 Flanking Active TSS Brain Substantia Nigra brain
14 chr16:72465400-72466400 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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