Variant report

Variant rs538988330
Chromosome Location chr19:20959620-20959621
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20958600-20960000 Active TSS Primary T cells from cord blood blood
2 chr19:20958800-20959800 Active TSS Primary monocytes fromperipheralblood blood
3 chr19:20958800-20959800 Active TSS Primary T regulatory cells fromperipheralblood blood
4 chr19:20958800-20959800 Active TSS Duodenum Smooth Muscle Duodenum
5 chr19:20958800-20959800 Active TSS Gastric stomach
6 chr19:20958800-20960000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
7 chr19:20958800-20960000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr19:20958800-20960000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr19:20958800-20960000 Active TSS Primary T helper cells PMA-I stimulated --
10 chr19:20958800-20960000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr19:20958800-20960000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr19:20958800-20960000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
13 chr19:20958800-20960000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
14 chr19:20958800-20960000 Active TSS Brain Angular Gyrus brain
15 chr19:20958800-20960000 Active TSS Brain Anterior Caudate brain
16 chr19:20958800-20960000 Active TSS Brain Cingulate Gyrus brain
17 chr19:20958800-20960000 Active TSS Brain Hippocampus Middle brain
18 chr19:20958800-20960000 Active TSS Brain Inferior Temporal Lobe brain
19 chr19:20958800-20960000 Active TSS Duodenum Mucosa Duodenum
20 chr19:20958800-20960000 Active TSS Fetal Lung lung
21 chr19:20958800-20960000 Active TSS HSMM muscle
22 chr19:20958800-20960000 Active TSS NHEK skin
23 chr19:20958800-20960200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr19:20958800-20960200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
25 chr19:20958800-20960200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr19:20958800-20960200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr19:20958800-20960200 Active TSS Brain Germinal Matrix brain
28 chr19:20958800-20960200 Active TSS Fetal Kidney kidney
29 chr19:20958800-20960200 Active TSS Rectal Mucosa Donor 29 rectum
30 chr19:20958800-20960200 Active TSS Thymus Thymus
31 chr19:20958800-20960200 Active TSS NH-A brain
32 chr19:20958800-20960200 Active TSS NHLF lung
33 chr19:20958800-20960200 Active TSS Osteobl bone
34 chr19:20958800-20960400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
35 chr19:20958800-20960400 Active TSS Fetal Brain Female brain
36 chr19:20959000-20959800 Active TSS Breast Myoepithelial Primary Cells Breast
37 chr19:20959000-20959800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
38 chr19:20959000-20959800 Active TSS Primary T helper naive cells from peripheral blood blood
39 chr19:20959000-20959800 Active TSS Primary T helper memory cells from peripheral blood 1 blood
40 chr19:20959000-20959800 Active TSS Primary T killer naive cells fromperipheralblood blood
41 chr19:20959000-20959800 Active TSS Primary T killer memory cells from peripheral blood blood
42 chr19:20959000-20959800 Active TSS Aorta Aorta
43 chr19:20959000-20959800 Active TSS Liver Liver
44 chr19:20959000-20959800 Active TSS Esophagus oesophagus
45 chr19:20959000-20959800 Active TSS Fetal Intestine Large intestine
46 chr19:20959000-20959800 Active TSS Left Ventricle heart
47 chr19:20959000-20959800 Active TSS Stomach Mucosa stomach
48 chr19:20959000-20960000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr19:20959000-20960000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr19:20959000-20960000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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