Variant report

Variant rs539205201
Chromosome Location chr10:43891565-43891566
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43889000-43892000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
2 chr10:43889000-43892200 Transcr. at gene 5' and 3' Dnd41 blood
3 chr10:43889200-43891600 Genic enhancers Primary B cells from peripheral blood blood
4 chr10:43889800-43891600 Weak transcription Aorta Aorta
5 chr10:43890000-43892000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
6 chr10:43890200-43891600 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr10:43890200-43891600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
8 chr10:43890200-43891800 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
9 chr10:43890200-43891800 Flanking Active TSS HUVEC blood vessel
10 chr10:43890200-43892000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr10:43890200-43892000 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
12 chr10:43890400-43891600 Transcr. at gene 5' and 3' A549 lung
13 chr10:43890400-43891800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr10:43890400-43891800 Transcr. at gene 5' and 3' Fetal Thymus thymus
15 chr10:43890400-43892000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
16 chr10:43890400-43892000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
17 chr10:43890400-43892200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
18 chr10:43890400-43893600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
19 chr10:43890600-43891600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr10:43890600-43891600 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr10:43890600-43891600 Flanking Active TSS HMEC breast
22 chr10:43890600-43891800 Flanking Active TSS Primary T cells from cord blood blood
23 chr10:43890600-43891800 Transcr. at gene 5' and 3' K562 blood
24 chr10:43890600-43891800 Transcr. at gene 5' and 3' Osteobl bone
25 chr10:43890600-43892000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
26 chr10:43890600-43892000 Transcr. at gene 5' and 3' Fetal Stomach stomach
27 chr10:43890600-43892200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr10:43890600-43893000 Active TSS Fetal Kidney kidney
29 chr10:43890600-43893200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr10:43890600-43893200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
31 chr10:43890800-43891600 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
32 chr10:43890800-43891600 Enhancers Primary monocytes fromperipheralblood blood
33 chr10:43890800-43891600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
34 chr10:43890800-43891600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr10:43890800-43891600 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
36 chr10:43890800-43891600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
37 chr10:43890800-43891600 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
38 chr10:43890800-43891600 Flanking Active TSS NH-A brain
39 chr10:43890800-43891800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
40 chr10:43890800-43891800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr10:43890800-43891800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
42 chr10:43890800-43891800 Active TSS Brain Germinal Matrix brain
43 chr10:43890800-43891800 Flanking Active TSS Fetal Brain Male brain
44 chr10:43890800-43891800 Flanking Active TSS Fetal Muscle Leg muscle
45 chr10:43890800-43892200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr10:43890800-43892200 Flanking Active TSS Adipose Nuclei Adipose
47 chr10:43890800-43892200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
48 chr10:43890800-43892200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
49 chr10:43890800-43893200 Active TSS HSMMtube muscle
50 chr10:43890800-43893400 Active TSS ES-UCSF4 Cell Line embryonic stem cell

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