Variant report

Variant	rs541127060
Chromosome Location	chr14:71701770-71701771
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041980	chr14:71196358-71767339	Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv542125	chr14:71196358-71767339	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
3	nsv1044090	chr14:71496198-71780026	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
4	nsv832827	chr14:71676178-71833519	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	esv3398574	chr14:71701024-71703572	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3379326	chr14:71701349-71703347	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71680600-71702600	Weak transcription	Brain Angular Gyrus	brain
2	chr14:71695600-71702600	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:71695800-71709400	Weak transcription	Pancreas	Pancrea
4	chr14:71699000-71702600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:71699000-71702600	Weak transcription	Esophagus	oesophagus
6	chr14:71699000-71702600	Weak transcription	Right Atrium	heart
7	chr14:71699200-71702600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr14:71699600-71702600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr14:71699600-71702600	Weak transcription	Fetal Muscle Leg	muscle
10	chr14:71699600-71707400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr14:71701000-71702800	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr14:71701200-71702600	Weak transcription	Stomach Mucosa	stomach
13	chr14:71701400-71702400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr14:71701400-71702400	Weak transcription	Brain Germinal Matrix	brain
15	chr14:71701600-71702600	Weak transcription	Fetal Brain Female	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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